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TrackMate 7:将最先进的分割算法集成到跟踪管道中。

TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines.

机构信息

Institut Pasteur, Université de Paris Cité, Image Analysis Hub, Paris, France.

Institut Pasteur, Université de Paris Cité, Biostatistics and Bioinformatic Hub, Paris, France.

出版信息

Nat Methods. 2022 Jul;19(7):829-832. doi: 10.1038/s41592-022-01507-1. Epub 2022 Jun 2.


DOI:10.1038/s41592-022-01507-1
PMID:35654950
Abstract

TrackMate is an automated tracking software used to analyze bioimages and is distributed as a Fiji plugin. Here, we introduce a new version of TrackMate. TrackMate 7 is built to address the broad spectrum of modern challenges researchers face by integrating state-of-the-art segmentation algorithms into tracking pipelines. We illustrate qualitatively and quantitatively that these new capabilities function effectively across a wide range of bio-imaging experiments.

摘要

TrackMate 是一款用于分析生物图像的自动跟踪软件,作为 Fiji 的一个插件发布。在此,我们介绍 TrackMate 的一个新版本。TrackMate 7 的构建旨在通过将最先进的分割算法集成到跟踪管道中,解决研究人员所面临的广泛的现代挑战。我们定性和定量地证明了这些新功能在广泛的生物成像实验中都能有效地发挥作用。

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本文引用的文献

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MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ.

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