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构建和表征 BsGDH-CatIB 变体,并将其用作生物催化中稳健且高活性氧化还原辅因子再生模块。

Construction and characterization of BsGDH-CatIB variants and application as robust and highly active redox cofactor regeneration module for biocatalysis.

机构信息

Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.

Institute of Biotechnology, RWTH Aachen University, 52074, Aachen, Germany.

出版信息

Microb Cell Fact. 2022 Jun 2;21(1):108. doi: 10.1186/s12934-022-01816-2.

DOI:10.1186/s12934-022-01816-2
PMID:35655182
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9161568/
Abstract

BACKGROUND

Catalytically active inclusion bodies (CatIBs) are known for their easy and cost efficient production, recyclability as well as high stability and provide an alternative purely biological technology for enzyme immobilization. Due to their ability to self-aggregate in a carrier-free, biodegradable form, no further laborious immobilization steps or additional reagents are needed. These advantages put CatIBs in a beneficial position in comparison to traditional immobilization techniques. Recent studies outlined the impact of cooperative effects of the linker and aggregation inducing tag on the activity level of CatIBs, requiring to test many combinations to find the best performing CatIB variant.

RESULTS

Here, we present the formation of 14 glucose dehydrogenase CatIB variants of Bacillus subtilis, a well-known enzyme in biocatalysis due to its capability for substrate coupled regeneration of reduced cofactors with cheap substrate glucose. Nine variants revealed activity, with highest productivity levels for the more rigid PT-Linker combinations. The best performing CatIB, BsGDH-PT-CBDCell, was characterized in more detail including long-term storage at -20 °C as well as NADH cofactor regeneration performance in repetitive batch experiments with CatIB recycling. After freezing, BsGDH-PT-CBDCell CatIB only lost approx. 10% activity after 8 weeks of storage. Moreover, after 11 CatIB recycling cycles in repetitive batch operation 80% of the activity was still present.

CONCLUSIONS

This work presents a method for the effective formation of a highly active and long-term stable BsGDH-CatIB as an immobilized enzyme for robust and convenient NADH regeneration.

摘要

背景

催化活性包含体(CatIBs)以其易于生产、成本效益高、可回收利用以及高稳定性而闻名,为酶固定化提供了一种纯粹的生物替代技术。由于其能够在无载体、可生物降解的形式中自聚集,因此不需要进一步费力的固定化步骤或额外的试剂。这些优势使 CatIBs 在与传统固定化技术相比时处于有利地位。最近的研究概述了接头和聚集诱导标签的协同效应对 CatIBs 活性水平的影响,需要测试许多组合以找到表现最佳的 CatIB 变体。

结果

在这里,我们展示了来自枯草芽孢杆菌的 14 种葡萄糖脱氢酶 CatIB 变体的形成,由于其能够利用廉价的底物葡萄糖偶联再生还原辅因子,因此该酶是生物催化中一种众所周知的酶。有 9 种变体显示出活性,具有更高的生产力水平刚性 PT-接头组合。表现最佳的 CatIB,BsGDH-PT-CBDCell,进行了更详细的表征,包括在 -20°C 下的长期储存以及在重复分批实验中 CatIB 回收的 NADH 辅因子再生性能。冷冻后,BsGDH-PT-CBDCell CatIB 在储存 8 周后仅损失约 10%的活性。此外,在重复分批操作中进行 11 次 CatIB 回收循环后,仍有 80%的活性。

结论

这项工作提出了一种有效的方法,可以形成一种高度活跃且长期稳定的 BsGDH-CatIB,作为一种固定化酶,用于稳健且方便的 NADH 再生。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/f6e7e7665cb0/12934_2022_1816_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/016827524252/12934_2022_1816_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/b81eeca9c22b/12934_2022_1816_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/1d27719f4ad5/12934_2022_1816_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/f6e7e7665cb0/12934_2022_1816_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/016827524252/12934_2022_1816_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/b81eeca9c22b/12934_2022_1816_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/1d27719f4ad5/12934_2022_1816_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d02f/9161568/f6e7e7665cb0/12934_2022_1816_Fig4_HTML.jpg

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本文引用的文献

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Sci Rep. 2021 Aug 19;11(1):16880. doi: 10.1038/s41598-021-96073-5.
2
Construction and comprehensive characterization of an EcLDCc-CatIB set-varying linkers and aggregation inducing tags.构建和综合表征 EcLDCc-CatIB 集变连接子和聚集诱导标签。
Microb Cell Fact. 2021 Feb 17;20(1):49. doi: 10.1186/s12934-021-01539-w.
3
Catalytically-active inclusion bodies for biotechnology-general concepts, optimization, and application.
用于生物技术的具有催化活性的包涵体——一般概念、优化及应用
Appl Microbiol Biotechnol. 2020 Sep;104(17):7313-7329. doi: 10.1007/s00253-020-10760-3. Epub 2020 Jul 10.
4
Tailoring the properties of (catalytically)-active inclusion bodies.定制(催化)活性包涵体的性质。
Microb Cell Fact. 2019 Feb 7;18(1):33. doi: 10.1186/s12934-019-1081-5.
5
Self-Assembling All-Enzyme Hydrogels for Flow Biocatalysis.自组装全酶水凝胶用于流动生物催化。
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A Synthetic Reaction Cascade Implemented by Colocalization of Two Proteins within Catalytically Active Inclusion Bodies.通过两种蛋白质在具有催化活性的包涵体内共定位实现的合成反应级联。
ACS Synth Biol. 2018 Sep 21;7(9):2282-2295. doi: 10.1021/acssynbio.8b00274. Epub 2018 Aug 20.
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Catalytically active inclusion bodies of L-lysine decarboxylase from E. coli for 1,5-diaminopentane production.大肠杆菌赖氨酸脱羧酶的催化活性包涵体生产 1,5-二氨基戊烷。
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