Department of Chemistry, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, Riyadh, 11671, Saudi Arabia.
School of Science, Westlake University, Hangzhou, People's Republic of China.
J Mol Model. 2022 Jun 6;28(7):181. doi: 10.1007/s00894-022-05179-8.
The performance of nanotubes (NT) of carbon (CC), aluminium-nitrogen (AlN), and boron-nitrogen (BN) as a sensor and nanocarrier for mercaptopurine (MCP) was investigated by means of a theoretical approach. The calculated negative values of adsorption energy showed the interaction and adsorption of MCP. Highest-occupied molecular orbital (HOMO) and lowest-unoccupied molecular orbital (LUMO) distributions were only found on the NT counter portion of the drug-nanotube not on MCP for AlN-NT and BN-NT while HOMO is over MCP and LUMO is over NT for CC-NT. The polarizability of MCP-NTs is greater than that of MCP. Raman wavenumbers of MCP are enhanced in NTs, and hence, NTs can act as a sensor for the detection of MCP. Solvent dependency on adsorption behaviour is also presented in the manuscript, where we found that the AlN nanotube showed exceptionally high free energy of adsorption over other nanotubes in all solvent mediums. Solvation-free energies were also reported. Noncovalent interaction scattered plot also showed significant intermolecular interaction between AlN nanotubes and the mercaptopurine when compared to other nanotubes under study. To find the antiviral activity of MCP and MCP-NTs against antiviral activities, docking and molecular dynamics simulations were performed with 1HMP PDB. Recovery times show that MCP desorption occurs quickly. The MD simulations and docking results show that BN and CC-NTs with MCP show good activity as drug carriers.
通过理论方法研究了碳(CC)、铝氮(AlN)和硼氮(BN)纳米管作为巯基嘌呤(MCP)传感器和纳米载体的性能。计算出的负吸附能值表明了 MCP 的相互作用和吸附。对于 AlN-NT 和 BN-NT,药物-纳米管的 NT 部分上仅发现最高占据分子轨道(HOMO)和最低未占据分子轨道(LUMO)分布,而在 CC-NT 上 HOMO 位于 MCP 之上,LUMO 位于 NT 之上。MCP-NT 的极化率大于 MCP。MCP 的 Raman 波数在 NT 中得到增强,因此 NT 可以作为检测 MCP 的传感器。本文还介绍了溶剂对吸附行为的依赖性,我们发现,在所有溶剂介质中,AlN 纳米管的吸附自由能异常高。还报告了溶剂化自由能。与研究中的其他纳米管相比,非共价相互作用散射图还显示了 AlN 纳米管和巯基嘌呤之间的显著分子间相互作用。为了研究 MCP 和 MCP-NT 的抗病毒活性,对 1HMP PDB 进行了对接和分子动力学模拟。恢复时间表明 MCP 快速解吸。MD 模拟和对接结果表明,BN 和 CC-NT 与 MCP 作为药物载体具有良好的活性。