• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于网络嵌入的网络结构差异量化。

Quantification of network structural dissimilarities based on network embedding.

作者信息

Wang Zhipeng, Zhan Xiu-Xiu, Liu Chuang, Zhang Zi-Ke

机构信息

Research Center for Complexity Sciences, Hangzhou Normal University, Hangzhou 311121, PR China.

College of Media and International Culture, Zhejiang University, Hangzhou 310058, PR China.

出版信息

iScience. 2022 May 23;25(6):104446. doi: 10.1016/j.isci.2022.104446. eCollection 2022 Jun 17.

DOI:10.1016/j.isci.2022.104446
PMID:35677641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9168171/
Abstract

Quantifying structural dissimilarities between networks is a fundamental and challenging problem in network science. Previous network comparison methods are based on the structural features, such as the length of shortest path and degree, which only contain part of the topological information. Therefore, we propose an efficient network comparison method based on network embedding, which considers the global structural information. In detail, we first construct a distance matrix for each network based on the distances between node embedding vectors derived from . Then, we define the dissimilarity between two networks based on Jensen-Shannon divergence of the distance distributions. Experiments on both synthetic and empirical networks show that our method outperforms the baseline methods and can distinguish networks well. In addition, we show that our method can capture network properties, e.g., average shortest path length and link density. Moreover, the experiment of modularity further implies the functionality of our method.

摘要

量化网络之间的结构差异是网络科学中的一个基本且具有挑战性的问题。以往的网络比较方法是基于结构特征,如最短路径长度和度,而这些仅包含部分拓扑信息。因此,我们提出了一种基于网络嵌入的高效网络比较方法,该方法考虑了全局结构信息。具体而言,我们首先基于从……导出的节点嵌入向量之间的距离为每个网络构建一个距离矩阵。然后,我们基于距离分布的 Jensen-Shannon 散度定义两个网络之间的差异。在合成网络和实证网络上的实验表明,我们的方法优于基线方法,并且能够很好地区分网络。此外,我们表明我们的方法可以捕捉网络属性,例如平均最短路径长度和链接密度。而且,模块化实验进一步暗示了我们方法的功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/b67a8f4a859e/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/5ac66afecdd3/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/985fe8878cb0/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/17f41c123ebf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/e4481be18774/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/10d428a6f653/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/615d776cd478/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/6a3a9dc1e236/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/b67a8f4a859e/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/5ac66afecdd3/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/985fe8878cb0/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/17f41c123ebf/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/e4481be18774/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/10d428a6f653/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/615d776cd478/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/6a3a9dc1e236/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26cb/9168171/b67a8f4a859e/gr7.jpg

相似文献

1
Quantification of network structural dissimilarities based on network embedding.基于网络嵌入的网络结构差异量化。
iScience. 2022 May 23;25(6):104446. doi: 10.1016/j.isci.2022.104446. eCollection 2022 Jun 17.
2
Directed Network Comparison Using Motifs.使用基序进行定向网络比较。
Entropy (Basel). 2024 Jan 31;26(2):128. doi: 10.3390/e26020128.
3
Complex network comparison based on communicability sequence entropy.基于传播序列熵的复杂网络比较。
Phys Rev E. 2018 Jul;98(1-1):012319. doi: 10.1103/PhysRevE.98.012319.
4
Quantification of network structural dissimilarities.网络结构差异的量化。
Nat Commun. 2017 Jan 9;8:13928. doi: 10.1038/ncomms13928.
5
A Path-Based Distribution Measure for Network Comparison.一种用于网络比较的基于路径的分布度量。
Entropy (Basel). 2020 Nov 12;22(11):1287. doi: 10.3390/e22111287.
6
Characterization of network complexity by communicability sequence entropy and associated Jensen-Shannon divergence.通过可通信性序列熵和相关的 Jensen-Shannon 散度对网络复杂性进行表征。
Phys Rev E. 2020 Apr;101(4-1):042305. doi: 10.1103/PhysRevE.101.042305.
7
The trade-off between wiring cost and network topology in white matter structural networks in health and migraine.健康和偏头痛患者白质结构网络中布线成本与网络拓扑结构之间的权衡。
Exp Neurol. 2013 Oct;248:196-204. doi: 10.1016/j.expneurol.2013.04.012. Epub 2013 May 3.
8
Context Attention Heterogeneous Network Embedding.上下文注意力异质网络嵌入。
Comput Intell Neurosci. 2019 Aug 21;2019:8106073. doi: 10.1155/2019/8106073. eCollection 2019.
9
Effective attributed network embedding with information behavior extraction.基于信息行为提取的有效属性网络嵌入
PeerJ Comput Sci. 2022 Jul 8;8:e1030. doi: 10.7717/peerj-cs.1030. eCollection 2022.
10
Characterizing dissimilarity of weighted networks.刻画加权网络的差异性。
Sci Rep. 2021 Mar 11;11(1):5768. doi: 10.1038/s41598-021-85175-9.

引用本文的文献

1
Directed Network Comparison Using Motifs.使用基序进行定向网络比较。
Entropy (Basel). 2024 Jan 31;26(2):128. doi: 10.3390/e26020128.

本文引用的文献

1
Network comparison and the within-ensemble graph distance.网络比较与集合内图距离
Proc Math Phys Eng Sci. 2020 Nov;476(2243):20190744. doi: 10.1098/rspa.2019.0744. Epub 2020 Nov 4.
2
Coupling dynamics of epidemic spreading and information diffusion on complex networks.复杂网络上流行病传播与信息扩散的耦合动力学
Appl Math Comput. 2018 Sep 1;332:437-448. doi: 10.1016/j.amc.2018.03.050. Epub 2018 Apr 10.
3
Complex network comparison based on communicability sequence entropy.基于传播序列熵的复杂网络比较。
Phys Rev E. 2018 Jul;98(1-1):012319. doi: 10.1103/PhysRevE.98.012319.
4
Quantification of network structural dissimilarities.网络结构差异的量化。
Nat Commun. 2017 Jan 9;8:13928. doi: 10.1038/ncomms13928.
5
node2vec: Scalable Feature Learning for Networks.节点2向量:网络的可扩展特征学习
KDD. 2016 Aug;2016:855-864. doi: 10.1145/2939672.2939754.
6
Quantifying randomness in real networks.量化真实网络中的随机性。
Nat Commun. 2015 Oct 20;6:8627. doi: 10.1038/ncomms9627.
7
Structural reducibility of multilayer networks.多层网络的结构约简。
Nat Commun. 2015 Apr 23;6:6864. doi: 10.1038/ncomms7864.
8
Alignment-free protein interaction network comparison.无比对的蛋白质相互作用网络比较
Bioinformatics. 2014 Sep 1;30(17):i430-7. doi: 10.1093/bioinformatics/btu447.
9
Complex brain networks: graph theoretical analysis of structural and functional systems.复杂脑网络:结构与功能系统的图论分析
Nat Rev Neurosci. 2009 Mar;10(3):186-98. doi: 10.1038/nrn2575. Epub 2009 Feb 4.
10
Modularity and community structure in networks.网络中的模块化与群落结构。
Proc Natl Acad Sci U S A. 2006 Jun 6;103(23):8577-82. doi: 10.1073/pnas.0601602103. Epub 2006 May 24.