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用于动态细胞极性信号传导的约束非线性和混合效应积分微分方程模型

Constrained Nonlinear and Mixed Effects Integral Differential Equation Models for Dynamic Cell Polarity Signaling.

作者信息

Xiao Zhen, Brunel Nicolas, Tian Chenwei, Guo Jingzhe, Yang Zhenbiao, Cui Xinping

机构信息

Department of Statistics, University of California, Riverside, Riverside, CA, United States.

Laboratoire de Mathématiques et Modélisation d'Evry, UMR CNRS 8071, ENSIIE, Évry-Courcouronnes, France.

出版信息

Front Plant Sci. 2022 May 25;13:847671. doi: 10.3389/fpls.2022.847671. eCollection 2022.

Abstract

Polar cell growth is a process that couples the establishment of cell polarity with growth and is extremely important in the growth, development, and reproduction of eukaryotic organisms, such as pollen tube growth during plant fertilization and neuronal axon growth in animals. Pollen tube growth requires dynamic but polarized distribution and activation of a signaling protein named ROP1 to the plasma membrane three processes: positive feedback and negative feedback regulation of ROP1 activation and its lateral diffusion along the plasma membrane. In this paper, we introduce a mechanistic integro-differential equation (IDE) along with constrained semiparametric regression to quantitatively describe the interplay among these three processes that lead to the polar distribution of active ROP1 at a steady state. Moreover, we introduce a population variability by a constrained nonlinear mixed model. Our analysis of ROP1 activity distributions from multiple pollen tubes revealed that the equilibrium between the positive and negative feedbacks for pollen tubes with similar shapes are remarkably stable, permitting us to infer an inherent quantitative relationship between the positive and negative feedback loops that defines the tip growth of pollen tubes and the polarity of tip growth.

摘要

极性细胞生长是一个将细胞极性的建立与生长相结合的过程,在真核生物的生长、发育和繁殖中极其重要,例如植物受精过程中的花粉管生长和动物中的神经元轴突生长。花粉管生长需要一种名为ROP1的信号蛋白在质膜上进行动态但极化的分布和激活,这涉及三个过程:ROP1激活的正反馈和负反馈调节以及其沿质膜的侧向扩散。在本文中,我们引入了一个机械积分 - 微分方程(IDE)以及约束半参数回归,以定量描述这三个过程之间的相互作用,这些相互作用导致活性ROP1在稳态下的极性分布。此外,我们通过约束非线性混合模型引入了群体变异性。我们对多个花粉管的ROP1活性分布的分析表明,形状相似的花粉管的正反馈和负反馈之间的平衡非常稳定,这使我们能够推断出定义花粉管顶端生长和顶端生长极性的正反馈和负反馈回路之间的内在定量关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3258/9175011/78a51338ad1f/fpls-13-847671-g0001.jpg

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