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诺特定理在基因组学中作为恰弗定律第二互补性规则的隐喻。

Noether's Theorem as a Metaphor for Chargaff's 2nd Parity Rule in Genomics.

机构信息

Theoretical Biology and Computational Genomics Laboratory, Institute of Bioscience and Applications, National Center for Scientific Research "Demokritos", 15341, Athens, Greece.

Statistical Mechanics and Dynamical Systems Laboratory, Institute of Nanoscience and Nanotechnology, National Center for Scientific Research, "Demokritos", 15341, Athens, Greece.

出版信息

J Mol Evol. 2022 Aug;90(3-4):231-238. doi: 10.1007/s00239-022-10062-4. Epub 2022 Jun 15.

Abstract

In the present note, the genomic compositional rule largely known as 'Chargaff's 2nd parity rule' (asserting equimolarity between Adenine-Thymine and Guanine-Cytosine in any of the two DNA strands) is regarded in association with Noether's theorem linking symmetries with conservation laws in physics. In the case of the genome, the strict physical and mathematical prerequisites of Noether's theorem do not hold. However, we conclude that a metaphor can be established with Noether's theorem, as inter-strand symmetry concerning DNA functionality engenders specific features in genome composition. Inversely, when inter-strand symmetry does not hold, the corresponding quantitative relations fail to appear. This association is also considered from the point of view of the existence of emergent laws and properties in evolutionary genomics.

摘要

在本注释中,与物理中的对称性与守恒定律相关联的诺特定理将被用于研究基因组组成的“Chargaff 第二守恒定则”(断言在任何两条 DNA 链中腺嘌呤-胸腺嘧啶和鸟嘌呤-胞嘧啶的摩尔相等)。在基因组的情况下,诺特定理的严格物理和数学前提并不成立。然而,我们得出结论,可以建立一个与诺特定理的隐喻,因为关于 DNA 功能的链间对称性产生了基因组组成的特定特征。相反,当链间对称性不成立时,相应的定量关系就不会出现。从进化基因组学中出现的规律和属性的角度也考虑了这种关联。

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