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系列组学与分子功能研究为黄瓜品种改良提供了新见解。

Serial-Omics and Molecular Function Study Provide Novel Insight into Cucumber Variety Improvement.

作者信息

Han Danni, Ma Xiaojun, Zhang Lei, Zhang Shizhong, Sun Qinghua, Li Pan, Shu Jing, Zhao Yanting

机构信息

Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.

State Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Taian 271018, China.

出版信息

Plants (Basel). 2022 Jun 20;11(12):1609. doi: 10.3390/plants11121609.

DOI:10.3390/plants11121609
PMID:35736760
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9228134/
Abstract

Cucumbers are rich in vitamins and minerals. The cucumber has recently become one of China's main vegetable crops. More specifically, the adjustment of the Chinese agricultural industry's structure and rapid economic development have resulted in increases in the planting area allocated to Chinese cucumber varieties and in the number of Chinese cucumber varieties. After complete sequencing of the "Chinese long" genome, the transcriptome, proteome, and metabolome were obtained. Cucumber has a small genome and short growing cycle, and these traits are conducive to the application of molecular breeding techniques for improving fruit quality. Here, we review the developments and applications of molecular markers and genetic maps for cucumber breeding and introduce the functions of gene families from the perspective of genomics, including fruit development and quality, hormone response, resistance to abiotic stress, epitomizing the development of other omics, and relationships among functions.

摘要

黄瓜富含维生素和矿物质。黄瓜最近已成为中国主要的蔬菜作物之一。更具体地说,中国农业产业结构的调整和经济的快速发展导致了分配给中国黄瓜品种的种植面积增加以及中国黄瓜品种数量的增加。在对“中国长”基因组进行全序列测序后,获得了转录组、蛋白质组和代谢组。黄瓜基因组小且生长周期短,这些特性有利于应用分子育种技术来改善果实品质。在此,我们综述了黄瓜育种中分子标记和遗传图谱的发展与应用,并从基因组学的角度介绍了基因家族的功能,包括果实发育与品质、激素反应、对非生物胁迫的抗性,概括了其他组学的发展以及功能之间的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c8c/9228134/07f757631721/plants-11-01609-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c8c/9228134/07f757631721/plants-11-01609-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7c8c/9228134/07f757631721/plants-11-01609-g001.jpg

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本文引用的文献

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Front Plant Sci. 2021 Aug 18;12:691576. doi: 10.3389/fpls.2021.691576. eCollection 2021.
2
A tubby-like protein CsTLP8 acts in the ABA signaling pathway and negatively regulates osmotic stresses tolerance during seed germination.一种类肥胖蛋白CsTLP8在脱落酸信号通路中起作用,并在种子萌发期间负向调节对渗透胁迫的耐受性。
BMC Plant Biol. 2021 Jul 17;21(1):340. doi: 10.1186/s12870-021-03126-y.
3
CsKTN1 for a katanin p60 subunit is associated with the regulation of fruit elongation in cucumber (Cucumis sativus L.).
CsKTN1 作为一种katanin p60 亚基与黄瓜(Cucumis sativus L.)果实伸长的调控有关。
Theor Appl Genet. 2021 Aug;134(8):2429-2441. doi: 10.1007/s00122-021-03833-y. Epub 2021 May 27.
4
Genome-wide identification and expression analysis of the trehalose-6-phosphate synthase () gene family in cucumber ( L.).黄瓜(Cucumis sativus L.)中海藻糖-6-磷酸合酶()基因家族的全基因组鉴定与表达分析 。 需注意,原文中“trehalose-6-phosphate synthase ()”括号内内容缺失,可能会影响对完整意思的准确理解。
PeerJ. 2021 Apr 30;9:e11398. doi: 10.7717/peerj.11398. eCollection 2021.
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Int J Mol Sci. 2021 Apr 18;22(8):4192. doi: 10.3390/ijms22084192.
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