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黄花药用植物 Schltr. 的完整叶绿体基因组。

The complete chloroplast genome of Schltr., a medicinal plant with yellow flowers.

作者信息

Zhao Dan, Liu Zhishang, Zhou Tao, Wu Zhikun, Zhang Yongping, Xiao Chenghong

机构信息

Guizhou University of Traditional Chinese Medicine, Guiyang, China.

Administration center of Nonggang National Nature Reserves, Longzhou, China.

出版信息

Mitochondrial DNA B Resour. 2022 Jun 10;7(6):1053-1055. doi: 10.1080/23802359.2021.1992316. eCollection 2022.

Abstract

Schltr. (Orchidaceae) is a traditional medicinal plant widely distributed in the south-central part of China. The complete chloroplast genome of was sequenced using the Illumina HiSeq X Ten platform. The chloroplast genome was 160,018 bp in length, which contained two short inverted repeat (IRa and IRb) regions of 26,295 bp and was separated by a large single copy (LSC) region of 88,270 bp and a small single copy (SSC) region of 19,158 bp. The GC content of the whole chloroplast genome was 37.2%. The chloroplast DNA of consisted of 114 distinct genes, including 80 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The phylogenetic tree showed that was sister to . Meanwhile, the monophyletic clade formed by all species of genus was closely related to genus .

摘要

石豆兰属(兰科)是一种传统药用植物,广泛分布于中国中南部。使用Illumina HiSeq X Ten平台对其完整叶绿体基因组进行了测序。叶绿体基因组长度为160,018 bp,包含两个长度为26,295 bp的短反向重复(IRa和IRb)区域,被一个88,270 bp的大单拷贝(LSC)区域和一个19,158 bp的小单拷贝(SSC)区域隔开。整个叶绿体基因组的GC含量为37.2%。石豆兰属的叶绿体DNA由114个不同的基因组成,包括80个蛋白质编码基因、4个核糖体RNA基因和30个转运RNA基因。系统发育树显示,石豆兰属与[具体属名未给出]是姐妹关系。同时,由石豆兰属所有物种形成的单系分支与[具体属名未给出]属密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf2b/9225769/9e6e92b7a62f/TMDN_A_1992316_F0001_C.jpg

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