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著名观赏植物和传统草药罗氏石斛的完整叶绿体基因组

Complete chloroplast genome of Rolfe, a famous ornamental plant and traditional medicinal herb.

作者信息

Du Yongxi, Liu Yanfeng, Liu Bo, Wang Tielin

机构信息

National Resource Center for Chinese Meteria Medica, China Academy of Chinese Medical Sciences, Beijing, P. R. China.

State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Sep 21;5(3):3383-3384. doi: 10.1080/23802359.2020.1820399.

DOI:10.1080/23802359.2020.1820399
PMID:33458178
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7781935/
Abstract

is a species of beauty-berry with large medicinal value belonging to the family Verbenaceae. In this study, the complete chloroplast genome of was sequenced using Illumina Hiseq X Ten platform. The chloroplast genome was 1,54,210 bp in length, containing two short inverted repeat (IRa and IRb) regions of 25,701 bp, which was separated by a large single copy (LSC) region of 84,938 bp and a small single copy (SSC) region of 17,870 bp. The GC content of the whole chloroplast genome was 38.1%. The chloroplast DNA of comprised 113 genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis indicated that the genus L. was located in the basal position within the family Verbenaceae. The chloroplast genome cpDNA) of was closely related to .

摘要

是马鞭草科一种具有巨大药用价值的紫珠属植物。在本研究中,使用Illumina Hiseq X Ten平台对其完整叶绿体基因组进行了测序。叶绿体基因组长度为154210bp,包含两个25701bp的短反向重复序列(IRa和IRb)区域,它们被一个84938bp的大单拷贝(LSC)区域和一个17870bp的小单拷贝(SSC)区域隔开。整个叶绿体基因组的GC含量为38.1%。该植物的叶绿体DNA由113个基因组成,包括79个蛋白质编码基因、4个核糖体RNA基因和30个转移RNA基因。系统发育分析表明,该属植物位于马鞭草科的基部位置。该植物的叶绿体基因组(cpDNA)与密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b32/7781935/ea2ff15aae15/TMDN_A_1820399_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b32/7781935/ea2ff15aae15/TMDN_A_1820399_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b32/7781935/ea2ff15aae15/TMDN_A_1820399_F0001_C.jpg

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