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来自多氯联苯污染沉积物微观世界的宏基因组、宏基因组组装基因组和宏转录组

Metagenomes, Metagenome-Assembled Genomes, and Metatranscriptomes from Polychlorinated Biphenyl-Contaminated Sediment Microcosms.

作者信息

Ewald Jessica M, Schnoor Jerald L, Mattes Timothy E

机构信息

Department of Civil and Environmental Engineering, University of Iowa, Iowa City, Iowa, USA.

出版信息

Microbiol Resour Announc. 2022 Jul 21;11(7):e0112621. doi: 10.1128/mra.01126-21. Epub 2022 Jun 29.

DOI:10.1128/mra.01126-21
PMID:35766865
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9302077/
Abstract

We present a comprehensive data set that describes an anaerobic microbial consortium native to polychlorinated biphenyl (PCB)-contaminated sediments. Obtained from sediment microcosms incubated for 200 days, the data set includes 4 metagenomes, 4 metatranscriptomes (in duplicate), and 62 metagenome-assembled genomes and captures microbial community interactions, structure, and function relevant to anaerobic PCB biodegradation.

摘要

我们展示了一个全面的数据集，该数据集描述了源自多氯联苯（PCB）污染沉积物的厌氧微生物群落。该数据集来自于培养200天的沉积物微观世界，包括4个宏基因组、4个宏转录组（一式两份）和62个宏基因组组装基因组，并捕捉了与厌氧PCB生物降解相关的微生物群落相互作用、结构和功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af04/9302077/d17c16283714/mra.01126-21-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af04/9302077/d17c16283714/mra.01126-21-f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af04/9302077/d17c16283714/mra.01126-21-f001.jpg

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