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从头到尾:获取、分类和应用高密度神经单神经元记录

From End to End: Gaining, Sorting, and Employing High-Density Neural Single Unit Recordings.

作者信息

Bod Réka Barbara, Rokai János, Meszéna Domokos, Fiáth Richárd, Ulbert István, Márton Gergely

机构信息

Laboratory of Experimental Neurophysiology, Department of Physiology, Faculty of Medicine, George Emil Palade University of Medicine, Pharmacy, Science and Technology of Târgu Mureş, Târgu Mureş, Romania.

Integrative Neuroscience Group, Institute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Budapest, Hungary.

出版信息

Front Neuroinform. 2022 Jun 13;16:851024. doi: 10.3389/fninf.2022.851024. eCollection 2022.

DOI:10.3389/fninf.2022.851024
PMID:35769832
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9236662/
Abstract

The meaning behind neural single unit activity has constantly been a challenge, so it will persist in the foreseeable future. As one of the most sourced strategies, detecting neural activity in high-resolution neural sensor recordings and then attributing them to their corresponding source neurons correctly, namely the process of spike sorting, has been prevailing so far. Support from ever-improving recording techniques and sophisticated algorithms for extracting worthwhile information and abundance in clustering procedures turned spike sorting into an indispensable tool in electrophysiological analysis. This review attempts to illustrate that in all stages of spike sorting algorithms, the past 5 years innovations' brought about concepts, results, and questions worth sharing with even the non-expert user community. By thoroughly inspecting latest innovations in the field of neural sensors, recording procedures, and various spike sorting strategies, a skeletonization of relevant knowledge lays here, with an initiative to get one step closer to the original objective: deciphering and building in the sense of neural transcript.

摘要

神经单单元活动背后的意义一直是个挑战,在可预见的未来仍将存在。作为最常用的策略之一,在高分辨率神经传感器记录中检测神经活动,然后将其正确归因于相应的源神经元,即尖峰分类过程,到目前为止一直很流行。不断改进的记录技术以及用于提取有价值信息的复杂算法,再加上聚类过程中的丰富性,使得尖峰分类成为电生理分析中不可或缺的工具。本综述试图说明,在尖峰分类算法的各个阶段,过去5年的创新带来了值得与非专业用户群体分享的概念、结果和问题。通过全面审视神经传感器领域、记录程序和各种尖峰分类策略的最新创新,相关知识的框架在此呈现,旨在朝着最初的目标更进一步:解读并构建神经转录的意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/de76e5d5e437/fninf-16-851024-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/05df9f1171c7/fninf-16-851024-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/b3bfd5167675/fninf-16-851024-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/9c3435142457/fninf-16-851024-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/e422076cf135/fninf-16-851024-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/de76e5d5e437/fninf-16-851024-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/05df9f1171c7/fninf-16-851024-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/b3bfd5167675/fninf-16-851024-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/9c3435142457/fninf-16-851024-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/e422076cf135/fninf-16-851024-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ddf/9236662/de76e5d5e437/fninf-16-851024-g0005.jpg

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本文引用的文献

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How Do Spike Collisions Affect Spike Sorting Performance?尖峰碰撞如何影响尖峰分类性能?
eNeuro. 2022 Oct 3;9(5). doi: 10.1523/ENEURO.0105-22.2022. Print 2022 Sep-Oct.
2
Online spike sorting via deep contractive autoencoder.基于深度收缩自编码器的在线尖峰分类。
Neural Netw. 2022 Nov;155:39-49. doi: 10.1016/j.neunet.2022.08.001. Epub 2022 Aug 5.
3
Optical phased array neural probes for beam-steering in brain tissue.用于脑组织中光束转向的光学相控阵神经探针。
Opt Lett. 2022 Mar 1;47(5):1073-1076. doi: 10.1364/OL.441609.
4
Large-scale neural recordings call for new insights to link brain and behavior.大规模神经记录需要新的见解来将大脑与行为联系起来。
Nat Neurosci. 2022 Jan;25(1):11-19. doi: 10.1038/s41593-021-00980-9. Epub 2022 Jan 3.
5
Light-weight electrophysiology hardware and software platform for cloud-based neural recording experiments.基于云的神经记录实验用轻量级电生理硬件和软件平台。
J Neural Eng. 2021 Nov 12;18(6). doi: 10.1088/1741-2552/ac310a.
6
CellExplorer: A framework for visualizing and characterizing single neurons.CellExplorer:可视化和分析单个神经元的框架。
Neuron. 2021 Nov 17;109(22):3594-3608.e2. doi: 10.1016/j.neuron.2021.09.002. Epub 2021 Sep 29.
7
Electrode pooling can boost the yield of extracellular recordings with switchable silicon probes.电极池可以提高可切换硅探针的细胞外记录的产量。
Nat Commun. 2021 Sep 2;12(1):5245. doi: 10.1038/s41467-021-25443-4.
8
P-sort: an open-source software for cerebellar neurophysiology.P-sort:一款用于小脑神经生理学的开源软件。
J Neurophysiol. 2021 Oct 1;126(4):1055-1075. doi: 10.1152/jn.00172.2021. Epub 2021 Aug 25.
9
Chronic, Multi-Site Recordings Supported by Two Low-Cost, Stationary Probe Designs Optimized to Capture Either Single Unit or Local Field Potential Activity in Behaving Rats.由两种低成本、固定探头设计支持的慢性多部位记录,这两种设计经过优化,可在行为大鼠中捕获单个神经元或局部场电位活动。
Front Psychiatry. 2021 Aug 5;12:678103. doi: 10.3389/fpsyt.2021.678103. eCollection 2021.
10
Building population models for large-scale neural recordings: Opportunities and pitfalls.为大规模神经记录构建群体模型:机遇与陷阱。
Curr Opin Neurobiol. 2021 Oct;70:64-73. doi: 10.1016/j.conb.2021.07.003. Epub 2021 Aug 17.