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嗜硫氧化细菌SOB56的异养硫氧化作用及其对热液环境的栖息地适应

Heterotrophic Sulfur Oxidation of SOB56 and Its Habitat Adaptation to the Hydrothermal Environment.

作者信息

Du Rui, Gao Di, Wang Yiting, Liu Lijun, Cheng Jingguang, Liu Jiwen, Zhang Xiao-Hua, Yu Min

机构信息

College of Marine Life Sciences, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, China.

Laboratory for Marine Ecology and Environmental Science, Pilot National Laboratory for Marine Science and Technology, Qingdao, China.

出版信息

Front Microbiol. 2022 Jun 14;13:888833. doi: 10.3389/fmicb.2022.888833. eCollection 2022.

DOI:10.3389/fmicb.2022.888833
PMID:35774465
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9237845/
Abstract

bacteria are ubiquitous in global marine environments, however, their sulfur-oxidizing abilities and survival adaptations in hydrothermal environments are not well understood. In this study, we characterized the sulfur oxidation ability and metabolic mechanisms of SOB56, which was isolated from the sediment of the Tangyin hydrothermal field in the Southern Okinawa Trough. Physiological characterizations showed that it is a heterotrophic sulfur-oxidizing bacterium that can oxidize thiosulfate to tetrathionate, with the NaSO degradation reaching 94.86%. Two potential thiosulfate dehydrogenase-related genes, and , were identified as encoding key catalytic enzymes, and their expression levels in strain SOB56 were significantly upregulated. Nine of fifteen examined genomes possess TsdA- and TsdB-homologous proteins, whose amino acid sequences have two typical Cys-X2-Cys-His heme-binding regions. Moreover, the thiosulfate oxidation process in SOB56 might be regulated by quorum sensing, and autoinducer-2 synthesis protein LuxS was identified in its genome. Regarding the mechanisms underlying adaptation to hydrothermal environment, strain SOB56 was capable of forming biofilms and producing EPS. In addition, genes related to complete flagellum assembly system, various signal transduction histidine kinases, heavy metal transporters, anaerobic respiration, and variable osmotic stress regulation were also identified. Our results shed light on the potential functions of heterotrophic bacteria in hydrothermal sulfur cycle and revealed possible adaptations for living at deep-sea hydrothermal fields by SOB56.

摘要

细菌在全球海洋环境中无处不在,然而,它们在热液环境中的硫氧化能力和生存适应性尚未得到充分了解。在本研究中,我们对从冲绳海槽南部汤阴热液区沉积物中分离出的SOB56的硫氧化能力和代谢机制进行了表征。生理特征表明,它是一种异养硫氧化细菌,能够将硫代硫酸盐氧化为连四硫酸盐,NaSO降解率达到94.86%。两个潜在的硫代硫酸盐脱氢酶相关基因 和 被鉴定为编码关键催化酶,它们在菌株SOB56中的表达水平显著上调。在15个检测的基因组中,有9个拥有与TsdA和TsdB同源的蛋白质,其氨基酸序列有两个典型的Cys-X2-Cys-His血红素结合区域。此外,SOB56中的硫代硫酸盐氧化过程可能受群体感应调节,并且在其基因组中鉴定出了自诱导物-2合成蛋白LuxS。关于其适应热液环境的机制,菌株SOB56能够形成生物膜并产生胞外聚合物。此外,还鉴定出了与完整鞭毛组装系统、各种信号转导组氨酸激酶、重金属转运蛋白、厌氧呼吸和可变渗透压应激调节相关的基因。我们的结果揭示了异养细菌在热液硫循环中的潜在功能,并揭示了SOB56在深海热液区生存的可能适应性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/ebe1d80aada9/fmicb-13-888833-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/22063cbbd538/fmicb-13-888833-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/d01f55a90d5b/fmicb-13-888833-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/1ac1ebec0d20/fmicb-13-888833-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/7eac5c1b0f78/fmicb-13-888833-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/ebe1d80aada9/fmicb-13-888833-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/22063cbbd538/fmicb-13-888833-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/d01f55a90d5b/fmicb-13-888833-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/1ac1ebec0d20/fmicb-13-888833-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/7eac5c1b0f78/fmicb-13-888833-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70d/9237845/ebe1d80aada9/fmicb-13-888833-g005.jpg

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