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HELLS 在泛癌中的诊断、预后和免疫作用:生物信息学分析。

Diagnostic, Prognostic, and Immunological Roles of HELLS in Pan-Cancer: A Bioinformatics Analysis.

机构信息

Department of Anesthesiology, West China Hospital, Sichuan University, Chengdu, China.

Department of Anesthesiology, Nanchong Central Hospital, The Second Clinical Medical College, North Sichuan Medical College, Nanchong, China.

出版信息

Front Immunol. 2022 Jun 14;13:870726. doi: 10.3389/fimmu.2022.870726. eCollection 2022.

DOI:10.3389/fimmu.2022.870726
PMID:35774795
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9237247/
Abstract

BACKGROUND

Inappropriate repair of DNA damage drives carcinogenesis. Lymphoid-specific helicase (HELLS) is an important component of the chromatin remodeling complex that helps repair DNA through various mechanisms such as DNA methylation, histone posttranslational modification, and nucleosome remodeling. Its role in human cancer initiation and progression has garnered recent attention. Our study aims to provide a more systematic and comprehensive understanding of the role of HELLS in the development and progression of multiple malignancies through analysis of HELLS in cancers.

METHODS

We explored the role of HELLS in cancers using The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) database. Multiple web platforms and software were used for data analysis, including R, Cytoscape, HPA, Archs4, TISIDB, cBioPortal, STRING, GSCALite, and CancerSEA.

RESULTS

High HELLS expression was found in a variety of cancers and differentially expressed across molecular and immune subtypes. HELLS was involved in many cancer pathways. Its expression positively correlated with Th2 and Tcm cells in most cancers. It also correlated with genetic markers of immunomodulators in various cancers.

CONCLUSIONS

Our study elucidates the role HELLS plays in promotion, inhibition, and treatment of different cancers. HELLS is a potential cancer diagnostic and prognostic biomarker with immune, targeted, or cytotoxic therapeutic value. This work is a prerequisite to clinical validation and treatment of HELLS in cancers.

摘要

背景

DNA 损伤的不当修复会导致癌症的发生。淋巴特异性解旋酶(HELLS)是染色质重塑复合物的重要组成部分,有助于通过多种机制修复 DNA,如 DNA 甲基化、组蛋白翻译后修饰和核小体重塑。它在人类癌症的起始和进展中的作用引起了最近的关注。我们的研究旨在通过分析癌症中的 HELLS,为理解 HELLS 在多种恶性肿瘤的发生和进展中的作用提供更系统和全面的认识。

方法

我们使用癌症基因组图谱(TCGA)和基因型-组织表达(GTEx)数据库来探索 HELLS 在癌症中的作用。使用 R、Cytoscape、HPA、Archs4、TISIDB、cBioPortal、STRING、GSCALite 和 CancerSEA 等多个网络平台和软件进行数据分析。

结果

在多种癌症中发现 HELLS 高表达,且在分子和免疫亚型上存在差异表达。HELLS 参与了许多癌症途径。它的表达与大多数癌症中的 Th2 和 Tcm 细胞呈正相关。它还与各种癌症中免疫调节剂的遗传标志物相关。

结论

我们的研究阐明了 HELLS 在不同癌症的促进、抑制和治疗中的作用。HELLS 是一种潜在的癌症诊断和预后生物标志物,具有免疫、靶向或细胞毒性治疗价值。这项工作是在癌症中对 HELLS 进行临床验证和治疗的前提。

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