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细菌传播的途径和速率影响着表土微生物组的组成和功能。

Routes and rates of bacterial dispersal impact surface soil microbiome composition and functioning.

机构信息

Department of Ecology and Evolutionary Biology, University of California - Irvine, Irvine, CA, USA.

Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM, USA.

出版信息

ISME J. 2022 Oct;16(10):2295-2304. doi: 10.1038/s41396-022-01269-w. Epub 2022 Jul 1.

Abstract

Recent evidence suggests that, similar to larger organisms, dispersal is a key driver of microbiome assembly; however, our understanding of the rates and taxonomic composition of microbial dispersal in natural environments is limited. Here, we characterized the rate and composition of bacteria dispersing into surface soil via three dispersal routes (from the air above the vegetation, from nearby vegetation and leaf litter near the soil surface, and from the bulk soil and litter below the top layer). We then quantified the impact of those routes on microbial community composition and functioning in the topmost litter layer. The bacterial dispersal rate onto the surface layer was low (7900 cells/cm/day) relative to the abundance of the resident community. While bacteria dispersed through all three routes at the same rate, only dispersal from above and near the soil surface impacted microbiome composition, suggesting that the composition, not rate, of dispersal influenced community assembly. Dispersal also impacted microbiome functioning. When exposed to dispersal, leaf litter decomposed faster than when dispersal was excluded, although neither decomposition rate nor litter chemistry differed by route. Overall, we conclude that the dispersal routes transport distinct bacterial communities that differentially influence the composition of the surface soil microbiome.

摘要

最近的证据表明,类似于较大的生物体,扩散是微生物组组装的关键驱动因素;然而,我们对自然环境中微生物扩散的速度和分类组成的理解是有限的。在这里,我们通过三种扩散途径(来自植被上方的空气、来自附近植被和靠近土壤表面的落叶以及来自顶层以下的土壤和落叶)来描述通过表面土壤扩散的细菌的速度和组成。然后,我们量化了这些途径对最上层落叶层微生物群落组成和功能的影响。细菌扩散到表层的速度相对较低(7900 个细胞/cm/天),低于驻留群落的丰度。虽然细菌通过所有三种途径以相同的速度扩散,但只有来自土壤表面上方和附近的扩散影响了微生物组的组成,这表明扩散的组成而不是速度影响了群落组装。扩散也影响了微生物组的功能。当暴露于扩散时,落叶的分解速度比排除扩散时更快,尽管三种途径的分解速度和落叶化学性质都没有差异。总的来说,我们得出结论,扩散途径输送不同的细菌群落,这些群落对表层土壤微生物组的组成有不同的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/12a3/9477824/e67cba87987b/41396_2022_1269_Fig1_HTML.jpg

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