Elmassry Moamen M, Ray Nandini, Sorge Sara, Webster Jennifer, Merry Kyle, Caserio Angelica, Vecellio Daniel J, Kruczek Cassandra, Dowd Scot, Ardon-Dryer Karin, Vanos Jennifer, San Francisco Michael J
Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Department of Geography, Texas A&M University, College Station, TX 77843, USA.
FEMS Microbes. 2020 Dec 15;1(1):xtaa009. doi: 10.1093/femsmc/xtaa009. eCollection 2020 Sep.
Individuals often experience ailments such as allergies, asthma and respiratory tract infections throughout the year. Weather reports often include estimations of common allergens that can affect these individuals. To describe the local 'atmospheric microbiome' in Lubbock, Texas, USA, we examined the culturable fungal and bacterial microbiome present in the air on calm and dust storm days using internal transcribed spacer (ITS)-1 and 16S rRNA amplicon sequencing, respectively. While some types of airborne fungi were frequently present throughout the year, distinct differences were also observed between calm and dust storm days. We also observed the influence of the origin of air parcels and wind elevation of the air trajectory. The most abundant genera of fungi identified during the study period were and . This observation was not surprising considering the agricultural intensive environment of West Texas. Interestingly, , a common allergenic mold, was increased during days with dust storm events. The predominant bacterial genera observed were and . The relative abundance of the psychrophiles, and , was surprising, given the semi-aridity of West Texas. Coupling our observations with back trajectories of the wind (Hybrid Single-Particle Lagrangian Integrated Trajectory models) demonstrated that dust storms, regional anthropogenic activity and origin of air parcels are important influences on the diversity and temporal presence of the atmospheric microbiome.
人们全年经常会出现过敏、哮喘和呼吸道感染等疾病。天气预报通常会包含对可能影响这些人的常见过敏原的预测。为了描述美国得克萨斯州拉伯克市当地的“大气微生物群”,我们分别使用内转录间隔区(ITS)-1和16S rRNA扩增子测序,研究了平静天气和沙尘暴天气下空气中可培养的真菌和细菌微生物群。虽然某些类型的空气传播真菌全年都经常出现,但在平静天气和沙尘暴天气之间也观察到了明显差异。我们还观察了气团来源和空气轨迹的风高度的影响。在研究期间鉴定出的最丰富的真菌属是 和 。考虑到西德克萨斯州农业密集的环境,这一观察结果并不令人惊讶。有趣的是,一种常见的致敏霉菌 在沙尘暴事件发生期间有所增加。观察到的主要细菌属是 和 。考虑到西德克萨斯州的半干旱环境,嗜冷菌 和 的相对丰度令人惊讶。将我们的观察结果与风的后向轨迹(混合单粒子拉格朗日积分轨迹模型)相结合表明,沙尘暴、区域人为活动和气团来源对大气微生物群的多样性和时间存在有重要影响。