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PSHG-TISS:一组固定组织的偏振分辨二次谐波产生显微镜图像集合。

PSHG-TISS: A collection of polarization-resolved second harmonic generation microscopy images of fixed tissues.

机构信息

Center for Microscopy-Microanalysis and Information Processing, University Politehnica of Bucharest, 060042, Bucharest, Romania.

Department of Pathology, Carol Davila University of Medicine and Pharmacy, Bucharest, Romania.

出版信息

Sci Data. 2022 Jul 2;9(1):376. doi: 10.1038/s41597-022-01477-1.

Abstract

Second harmonic generation (SHG) microscopy is acknowledged as an established imaging technique capable to provide information on the collagen architecture in tissues that is highly valuable for the diagnostics of various pathologies. The polarization-resolved extension of SHG (PSHG) microscopy, together with associated image processing methods, retrieves extensive image sets under different input polarization settings, which are not fully exploited in clinical settings. To facilitate this, we introduce PSHG-TISS, a collection of PSHG images, accompanied by additional computationally generated images which can be used to complement the subjective qualitative analysis of SHG images. These latter have been calculated using the single-axis molecule model for collagen and provide 2D representations of different specific PSHG parameters known to account for the collagen structure and distribution. PSHG-TISS can aid refining existing PSHG image analysis methods, while also supporting the development of novel image processing and analysis methods capable to extract meaningful quantitative data from the raw PSHG image sets. PSHG-TISS can facilitate the breadth and widespread of PSHG applications in tissue analysis and diagnostics.

摘要

二次谐波产生(SHG)显微镜被公认为一种成熟的成像技术,能够提供组织中胶原结构的信息,这对各种病理的诊断具有非常重要的价值。SHG 的偏振分辨扩展(PSHG)显微镜,以及相关的图像处理方法,可以在不同的输入偏振设置下获取大量的图像集,但这些在临床环境中并没有得到充分利用。为了方便这一点,我们引入了 PSHG-TISS,这是一组 PSHG 图像,以及额外的计算生成的图像,可用于补充 SHG 图像的主观定性分析。后者是使用单轴分子模型对胶原蛋白进行计算的,提供了不同特定 PSHG 参数的 2D 表示,这些参数已知可以说明胶原蛋白的结构和分布。PSHG-TISS 可以帮助改进现有的 PSHG 图像分析方法,同时也支持开发新的图像处理和分析方法,从原始 PSHG 图像集中提取有意义的定量数据。PSHG-TISS 可以促进 PSHG 在组织分析和诊断中的广泛应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1862/9250519/75c283d3a658/41597_2022_1477_Fig1_HTML.jpg

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