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G4四链体结合蛋白:综述及选择性见解

G4-quadruplex-binding proteins: review and insights into selectivity.

作者信息

Meier-Stephenson Vanessa

机构信息

Department of Medicine, Division of Infectious Diseases, University of Alberta, Edmonton, AB Canada.

Department of Medical Microbiology and Immunology, University of Alberta, Edmonton, AB Canada.

出版信息

Biophys Rev. 2022 Apr 20;14(3):635-654. doi: 10.1007/s12551-022-00952-8. eCollection 2022 Jun.

DOI:10.1007/s12551-022-00952-8
PMID:35791380
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9250568/
Abstract

There are over 700,000 putative G4-quadruplexes (G4Qs) in the human genome, found largely in promoter regions, telomeres, and other regions of high regulation. Growing evidence links their presence to functionality in various cellular processes, where cellular proteins interact with them, either stabilizing and/or anchoring upon them, or unwinding them to allow a process to proceed. Interest in understanding and manipulating the plethora of processes regulated by these G4Qs has spawned a new area of small-molecule binder development, with attempts to mimic and block the associated G4-binding protein (G4BP). Despite the growing interest and focus on these G4Qs, there is limited data (in particular, high-resolution structural information), on the nature of these G4Q-G4BP interactions and what makes a G4BP selective to certain G4Qs, if in fact they are at all. This review summarizes the current literature on G4BPs with regards to their interactions with G4Qs, providing groupings for binding mode, drawing conclusions around commonalities and highlighting information on specific interactions where available.

摘要

人类基因组中存在超过70万个推定的G4-四链体(G4Q),主要存在于启动子区域、端粒和其他高度调控的区域。越来越多的证据表明它们的存在与各种细胞过程中的功能相关,细胞蛋白与它们相互作用,要么使其稳定和/或附着其上,要么使其解旋以允许某个过程继续进行。对理解和操纵这些G4Q所调控的众多过程的兴趣催生了小分子结合剂开发的新领域,人们试图模拟和阻断相关的G4结合蛋白(G4BP)。尽管对这些G4Q的兴趣和关注日益增加,但关于这些G4Q-G4BP相互作用的性质以及是什么使得G4BP对某些G4Q具有选择性(如果它们确实具有选择性的话)的数据有限(特别是高分辨率结构信息)。本综述总结了当前关于G4BP与G4Q相互作用的文献,对结合模式进行了分组,围绕共性得出结论,并在可行的情况下突出特定相互作用的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/42be21de592e/12551_2022_952_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/dcceb7afa036/12551_2022_952_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/43c4fc9d9089/12551_2022_952_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/e2bcc31fe680/12551_2022_952_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/c6e528907297/12551_2022_952_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/42be21de592e/12551_2022_952_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/dcceb7afa036/12551_2022_952_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/43c4fc9d9089/12551_2022_952_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/e2bcc31fe680/12551_2022_952_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/c6e528907297/12551_2022_952_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/81f0/9250568/42be21de592e/12551_2022_952_Fig5_HTML.jpg

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bioRxiv. 2025 Apr 6:2025.04.04.647332. doi: 10.1101/2025.04.04.647332.
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