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在 中全基因组鉴定和生长调节因子家族基因的特征分析。

Genome-Wide Identification and Characterization of Growth Regulatory Factor Family Genes in .

机构信息

Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China.

College of Horticulture, Hunan Agricultural University, Changsha 410128, China.

出版信息

Int J Mol Sci. 2022 Jun 21;23(13):6905. doi: 10.3390/ijms23136905.

Abstract

Growth Regulatory Factors (GRF) are plant-specific transcription factors that play critical roles in plant growth and development as well as plant tolerance against stress. In this study, a total of 16 genes were identified from the genomes of and . Multiple sequence alignment analysis showed that all these members contain conserved QLQ and WRC domains. Phylogenetic analysis suggested that these GRF proteins could be classified into five clusters. The genes showed similar exon-intron organizations and similar architectures in their conserved motifs. Many stress-related -acting elements were found in their promoter region, and most of them were related to drought and defense response. In addition, analyses on microarray and transcriptome data indicated that these genes exhibited distinct expression patterns in various tissues or in response to drought and salt treatments. In particular, qPCR results showed that the expression levels of gene pairs - and - were significantly increased under NaCl and mannitol treatments, indicating that they are most likely involved in salt and drought stress tolerance. Collectively, our study is valuable for further investigation on the function of genes in and for the exploration of genes in the molecular breeding of highly resistant .

摘要

生长调节因子(GRF)是植物特异性转录因子,在植物生长发育以及植物对胁迫的耐受中发挥着关键作用。在本研究中,从 和 的基因组中鉴定出了总共 16 个基因。多重序列比对分析表明,所有这些成员都含有保守的 QLQ 和 WRC 结构域。系统发育分析表明,这些 GRF 蛋白可以分为五个簇。这些 基因显示出相似的外显子-内含子组织和保守基序中的相似结构。在它们的启动子区域发现了许多与应激相关的顺式作用元件,其中大多数与干旱和防御反应有关。此外,对微阵列和转录组数据的分析表明,这些 基因在不同组织或响应干旱和盐处理时表现出不同的表达模式。特别是,qPCR 结果表明,基因对 和 在 NaCl 和甘露醇处理下的表达水平显著增加,表明它们可能参与盐和干旱胁迫耐受。总的来说,我们的研究对于进一步研究 和 基因在 中的功能以及探索 基因在高抗性 的分子育种中具有重要价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0ce/9266564/a9ea4c237420/ijms-23-06905-g001.jpg

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