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干血斑用于以最少资源加速兽医生物样本库采集及鉴定代谢组学生物标志物的适用性

Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources.

作者信息

Allaway David, Alexander Janet E, Carvell-Miller Laura J, Reynolds Rhiannon M, Winder Catherine L, Weber Ralf J M, Lloyd Gavin R, Southam Andrew D, Dunn Warwick B

机构信息

WALTHAM Petcare Science Institute, Freeby Lane, Waltham-on-the-Wolds, Melton Mowbray, United Kingdom.

School of Biosciences and Phenome Centre Birmingham, University of Birmingham, Birmingham, United Kingdom.

出版信息

Front Vet Sci. 2022 Jun 22;9:887163. doi: 10.3389/fvets.2022.887163. eCollection 2022.

Abstract

Biomarker discovery using biobank samples collected from veterinary clinics would deliver insights into the diverse population of pets and accelerate diagnostic development. The acquisition, preparation, processing, and storage of biofluid samples in sufficient volumes and at a quality suitable for later analysis with most suitable discovery methods remain challenging. Metabolomics analysis is a valuable approach to detect health/disease phenotypes. Pre-processing changes during preparation of plasma/serum samples may induce variability that may be overcome using dried blood spots (DBSs). We report a proof of principle study by metabolite fingerprinting applying UHPLC-MS of plasma and DBSs acquired from healthy adult dogs and cats (age range 1-9 years), representing each of 4 dog breeds (Labrador retriever, Beagle, Petit Basset Griffon Vendeen, and Norfolk terrier) and the British domestic shorthair cat (n = 10 per group). Blood samples (20 and 40 μL) for DBSs were loaded onto filter paper, air-dried at room temperature (3 h), and sealed and stored (4°C for ~72 h) prior to storage at -80°C. Plasma from the same blood draw (250 μL) was prepared and stored at -80°C within 1 h of sampling. Metabolite fingerprinting of the DBSs and plasma produced similar numbers of metabolite features that had similar abilities to discriminate between biological classes and correctly assign blinded samples. These provide evidence that DBSs, sampled in a manner amenable to application in in-clinic/in-field processing, are a suitable sample for biomarker discovery using UHPLC-MS metabolomics. Further, given appropriate owner consent, the volumes tested (20-40 μL) make the acquisition of remnant blood from blood samples drawn for other reasons available for biobanking and other research activities. Together, this makes possible large-scale biobanking of veterinary samples, gaining sufficient material sooner and enabling quicker identification of biomarkers of interest.

摘要

利用从兽医诊所收集的生物样本库样本进行生物标志物发现,将有助于深入了解宠物的多样化群体,并加速诊断方法的开发。以足够的体积和适合后续使用最合适的发现方法进行分析的质量获取、制备、处理和储存生物流体样本,仍然具有挑战性。代谢组学分析是检测健康/疾病表型的一种有价值的方法。血浆/血清样本制备过程中的预处理变化可能会导致变异性,而使用干血斑(DBS)可以克服这种变异性。我们报告了一项原理验证研究,通过代谢物指纹图谱法,应用超高效液相色谱-质谱联用仪(UHPLC-MS)对从健康成年犬和猫(年龄范围1至9岁)采集的血浆和DBS进行分析,这些犬猫分别代表4个犬种(拉布拉多寻回犬、比格犬、小猎兔犬和诺福克梗)和英国本土短毛猫(每组n = 10)。用于制备DBS的血样(20和40 μL)被滴加在滤纸上,在室温下风干(3小时),密封并储存(4°C约72小时),然后在-80°C下保存。同一采血样本(250 μL)的血浆在采样后1小时内制备并储存在-80°C。DBS和血浆的代谢物指纹图谱产生了相似数量的代谢物特征,这些特征在区分生物类别和正确分类盲样方面具有相似的能力。这些结果证明,以适合临床/现场处理的方式采集的DBS是使用UHPLC-MS代谢组学进行生物标志物发现的合适样本。此外,在获得所有者适当同意的情况下,所测试的体积(20 - 40 μL)使得从因其他原因采集的血样中获取剩余血液用于生物样本库和其他研究活动成为可能。总之,这使得大规模的兽医样本生物样本库成为可能,更快地获得足够的材料,并能够更快地识别感兴趣的生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9788/9258959/86ed13933839/fvets-09-887163-g0001.jpg

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