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OOP-ESEEM光谱学:生物分子中自旋相关自由基对距离的准确性。

OOP-ESEEM Spectroscopy: Accuracies of Distances of Spin-Correlated Radical Pairs in Biomolecules.

作者信息

Al Said Tarek, Weber Stefan, Schleicher Erik

机构信息

Institute of Physical Chemistry, University of Freiburg, Freiburg, Germany.

出版信息

Front Mol Biosci. 2022 Jun 23;9:890826. doi: 10.3389/fmolb.2022.890826. eCollection 2022.

Abstract

In addition to the commonly used electron-electron double resonance (ELDOR) technique, there are several other electron paramagnetic resonance (EPR) methods by which structure information can be obtained by exploiting the dipolar coupling between two radicals based on its characteristic dependence. In this contribution, we explore the potential of out-of-phase-electron-spin echo envelope modulation (OOP-ESEEM) spectroscopy to collect accurate distance information in photo-sensitive (bio) molecules. Although the method has already been applied to spin-correlated radical pairs in several classes of light-active proteins, the accuracy of the information obtained has not yet been extensively evaluated. To do this in a system-independent fashion, OOP-ESEEM time traces simulated with different values of the dipolar and exchange couplings were generated and analyzed in a best-possible way. Excellent agreement between calculated and numerically fitted values over a wide range of distances (between 15 and 45 Å) was obtained. Furthermore, the limitations of the method and the dependence on various experimental parameters could be evaluated.

摘要

除了常用的电子-电子双共振(ELDOR)技术外,还有其他几种电子顺磁共振(EPR)方法,通过利用两个自由基之间基于其特征依赖性的偶极耦合,可以获得结构信息。在本论文中,我们探索了异相电子自旋回波包络调制(OOP-ESEEM)光谱法在光敏(生物)分子中收集精确距离信息的潜力。尽管该方法已应用于几类光活性蛋白中的自旋相关自由基对,但所获得信息的准确性尚未得到广泛评估。为了以一种与系统无关的方式做到这一点,我们生成并以尽可能好的方式分析了用不同偶极和交换耦合值模拟的OOP-ESEEM时间轨迹。在很宽的距离范围(15至45埃)内,计算值与数值拟合值之间取得了极好的一致性。此外,还可以评估该方法的局限性以及对各种实验参数的依赖性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b155/9262093/e2e97b4f092e/fmolb-09-890826-g001.jpg

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