Ellerstrand Simon Jacobsen, Choudhury Shruti, Svensson Kajsa, Andersson Martin N, Kirkeby Carsten, Powell Daniel, Schlyter Fredrik, Jönsson Anna Maria, Brydegaard Mikkel, Hansson Bengt, Runemark Anna
Department of Biology Lund University Lund Sweden.
Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre Swedish University of Agricultural Sciences Umeå Sweden.
Ecol Evol. 2022 Jul 6;12(7):e9078. doi: 10.1002/ece3.9078. eCollection 2022 Jul.
The Eurasian spruce bark beetle, , is a major pest, capable of killing spruce forests during large population outbreaks. Recorded dispersal distances of individual beetles are typically within hundreds of meters or a few kilometers. However, the connectivity between populations at larger distances and longer time spans and how this is affected by the habitat is less studied, despite its importance for understanding at which distances local outbreaks may spread. Previous population genetic studies in typically used low resolution markers. Here, we use genome-wide data to assess population structure and connectivity of in Sweden. We used 152 individuals from 19 population samples, distributed over 830 km from Strömsund (63° 46' 8″ N) in the north to Nyteboda (56° 8' 50″ N) in the south, to capture processes at a large regional scale, and a transect sampling design adjacent to a recent outbreak to capture processes at a smaller scale (76 km). Using restriction site-associated DNA sequencing (RADseq) markers capturing 1409-1997 SNPs throughout the genome, we document a weak genetic structure over the large scale, potentially indicative of high connectivity with extensive gene flow. No differentiation was detected at the smaller scale. We find indications of isolation-by-distance both for relative ( ) and absolute divergence (Dxy). The two northernmost populations are most differentiated from the remaining populations, and diverge in parallel to the southern populations for a set of outlier loci. In conclusion, the population structure of in Sweden is weak, suggesting a high capacity to disperse and establish outbreak populations in new territories.
欧亚云杉树皮甲虫是一种主要害虫,在大量繁殖爆发期间能够杀死云杉林。单个甲虫的记录扩散距离通常在数百米或几公里之内。然而,尽管远距离和长时间跨度的种群之间的连通性及其受栖息地影响的方式对于理解局部爆发可能在哪些距离扩散很重要,但相关研究较少。此前对欧亚云杉树皮甲虫的种群遗传学研究通常使用低分辨率标记。在这里,我们使用全基因组数据来评估瑞典欧亚云杉树皮甲虫的种群结构和连通性。我们从19个种群样本中选取了152个个体,分布在从北部的斯特伦松德(北纬63°46'8″)到南部的尼特博达(北纬56°8'50″)的830公里范围内,以捕捉大区域尺度上的过程,并在最近一次爆发附近采用样带抽样设计来捕捉较小尺度(76公里)上的过程。使用在整个基因组中捕获1409 - 1997个单核苷酸多态性(SNP)的限制性位点相关DNA测序(RADseq)标记,我们记录了大尺度上微弱的遗传结构,这可能表明存在广泛基因流的高连通性。在较小尺度上未检测到分化。我们发现相对分化(Fst)和绝对分化(Dxy)都存在距离隔离的迹象。最北部的两个种群与其余种群差异最大,并且在一组异常位点上与南部种群平行分化。总之,瑞典欧亚云杉树皮甲虫的种群结构较弱,表明其在新区域扩散和建立爆发种群的能力较高。