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粪杆菌属新种和尿粪杆菌属新种,从人体中分离得到。

Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans.

机构信息

Aix Marseille Univ, IRD, AP-HM, MEPHI, Marseille, France.

IHU-Méditerranée Infection, Institut Hospitalo-Universitaire Méditerranée-Infection, 19-21 Boulevard Jean Moulin, 13385, Marseille cedex 05, France.

出版信息

Arch Microbiol. 2022 Jul 20;204(8):506. doi: 10.1007/s00203-022-03044-z.

Abstract

Strains Marseille-P3761 and Marseille-P3195 are representatives of two bacterial species isolated from human specimens. Strain Marseille-P3761 was isolated from the stool of a healthy volunteer, while strain Marseille-P3915 was cultivated from the urine of a kidney transplant recipient. Both strains are anaerobic Gram-positive coccoid bacteria. Both are catalase-negative and oxidase-negative and grow optimally at 37 °C in anaerobic conditions. They also metabolize carbohydrates, such as galactose, glucose, fructose, and glycerol. The major fatty acids were hexadecanoic acid for both strains. The highest digital DNA-DNA hybridization (dDDH) values of Marseille-P3761 and Marseille-P3195 strains when compared to their closest phylogenetic relatives were 52.3% and 56.4%, respectively. Strains Marseille-P3761 and Marseille-P3195 shared an OrthoANI value of 83.5% which was the highest value found with Peptoniphilus species studied here. The morphological, biochemical, phenotypic and genomic characteristics strongly support that these strains are new members of the Peptoniphilus genus. Thus, we suggest that Peptoniphilus coli sp. nov., and Peptoniphilus urinae sp. nov., are new species for which strains Marseille-P3761 (CSUR P3761 = CCUG 71,569) and Marseille-P3195 (CSUR P3195 = DSM 103,468) are their type strains, respectively of two new Peptoniphilus species, for which we propose the names Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., respectively.

摘要

马赛氏 P3761 株和马赛氏 P3195 株是从人体标本中分离出来的两种细菌代表株。马赛氏 P3761 株从一名健康志愿者的粪便中分离出来,而马赛氏 P3195 株则从一名肾移植受者的尿液中培养出来。两株菌均为厌氧革兰阳性球菌。两株菌均为过氧化氢酶阴性和氧化酶阴性,在厌氧条件下最佳生长温度为 37°C。它们还代谢葡萄糖、果糖、半乳糖和甘油等碳水化合物。两种菌株的主要脂肪酸均为十六烷酸。马赛氏 P3761 株和马赛氏 P3195 株与最接近的系统发育亲缘关系菌株的数字 DNA-DNA 杂交(dDDH)值最高分别为 52.3%和 56.4%。马赛氏 P3761 株和马赛氏 P3195 株的 OrthoANI 值为 83.5%,这是本研究中与 Peptoniphilus 属的菌株相比最高的值。形态学、生化、表型和基因组特征强烈支持这些菌株是 Peptoniphilus 属的新成员。因此,我们建议将这两株菌分别命名为新种大肠埃希氏菌 Peptoniphilus coli sp. nov. 和尿肠球菌 Peptoniphilus urinae sp. nov.,它们是两个新种的模式菌株,分别代表两个新的 Peptoniphilus 种。

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