Marmara University, Faculty of Medicine, Department of Microbiology, Istanbul, Turkey.
Research Service, VA Medical Center West Los Angeles, CA, USA.
Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2336-2341. doi: 10.1099/ijs.0.031997-0. Epub 2011 Nov 18.
Two previously uncharacterized strains of Gram-reaction-positive, anaerobic, coccus-shaped bacteria, designated strains WAL 18896(T) and WAL 18898(T), were recovered from human wound specimens and characterized using phenotypic, chemotaxonomic and molecular taxonomic methods. Comparative 16S rRNA gene sequence analysis and chemotaxonomic and biochemical characteristics demonstrated that these organisms are genotypically and phenotypically distinct and represent previously unidentified sublines within the order Clostridiales in the phylum Firmicutes. Pairwise sequence analysis demonstrated that the novel organisms had 91.9% sequence similarity to each other and were most closely related to members of the genus Peptoniphilus. The major long-chain fatty acids of both strains were C(16:0,) C(18:0), C(18:1)ω9c and C(18:2)ω6,9c. Based on the phenotypic and phylogenetic findings, strains WAL 18896(T) ( = CCUG 56065(T) = ATCC BAA-1640(T)) and WAL 18898(T) ( = CCUG 56067(T) = ATCC BAA-1638(T) = DSM 22616(T)) represent two novel species, for which the names Peptoniphilus duerdenii sp. nov. and Peptoniphilus koenoeneniae sp. nov. are proposed, respectively.
两株先前未被描述的革兰氏阳性、厌氧、球形球菌菌株,命名为 WAL 18896(T) 和 WAL 18898(T),从人类伤口标本中分离得到,并通过表型、化学分类和分子分类学方法进行了表征。比较 16S rRNA 基因序列分析以及化学分类学和生化特征表明,这些生物体在基因型和表型上是独特的,代表了厚壁菌门梭菌目中未被识别的亚系。成对序列分析表明,新的生物体彼此之间具有 91.9%的序列相似性,与 Peptoniphilus 属的成员最为密切相关。两种菌株的主要长链脂肪酸均为 C(16:0)、C(18:0)、C(18:1)ω9c 和 C(18:2)ω6,9c。基于表型和系统发育的发现,WAL 18896(T) ( = CCUG 56065(T) = ATCC BAA-1640(T)) 和 WAL 18898(T) ( = CCUG 56067(T) = ATCC BAA-1638(T) = DSM 22616(T)) 代表两种新的物种,分别命名为 Peptoniphilus duerdenii sp. nov. 和 Peptoniphilus koenoeneniae sp. nov.。