Dai Xiaofeng, Shen Li
Wuxi School of Medicine, Jiangnan University, Wuxi, China.
Front Med (Lausanne). 2022 Jul 1;9:911861. doi: 10.3389/fmed.2022.911861. eCollection 2022.
The human history has witnessed the rapid development of technologies such as high-throughput sequencing and mass spectrometry that led to the concept of "omics" and methodological advancement in systematically interrogating a cellular system. Yet, the ever-growing types of molecules and regulatory mechanisms being discovered have been persistently transforming our understandings on the cellular machinery. This renders cell omics seemingly, like the universe, expand with no limit and our goal toward the complete harness of the cellular system merely impossible. Therefore, it is imperative to review what has been done and is being done to predict what can be done toward the translation of omics information to disease control with minimal cell perturbation. With a focus on the "four big omics," i.e., genomics, transcriptomics, proteomics, metabolomics, we delineate hierarchies of these omics together with their epiomics and interactomics, and review technologies developed for interrogation. We predict, among others, redoxomics as an emerging omics layer that views cell decision toward the physiological or pathological state as a fine-tuned redox balance.
人类历史见证了高通量测序和质谱等技术的快速发展,这些技术催生了“组学”概念,并在系统研究细胞系统方面取得了方法学上的进步。然而,不断发现的分子类型和调控机制持续改变着我们对细胞机制的理解。这使得细胞组学似乎如同宇宙一般,无限制地扩展,而我们完全掌控细胞系统的目标变得遥不可及。因此,迫切需要回顾已经完成和正在进行的工作,以预测在最小程度干扰细胞的情况下,将组学信息转化为疾病控制的可行措施。聚焦于“四大组学”,即基因组学、转录组学、蛋白质组学和代谢组学,我们描绘了这些组学及其表观组学和相互作用组学的层次结构,并综述了用于研究的技术。我们预测,氧化还原组学作为一个新兴的组学层面,将细胞向生理或病理状态的转变视为一种精确调节的氧化还原平衡。