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粘质沙雷氏菌噬菌体BUCT660的基因组分析

Genomic Analysis of the Serratia marcescens Bacteriophage BUCT660.

作者信息

Li Yahao, Han Pengjun, Pu Mingfang, Li Fei, Li Mengzhe, An Xiaoping, Song Lihua, Fan Huahao, Tong Yigang, Chen Zeliang

机构信息

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, China.

College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.

出版信息

Microbiol Resour Announc. 2022 Aug 18;11(8):e0040622. doi: 10.1128/mra.00406-22. Epub 2022 Jul 14.

Abstract

Here, we report the complete genome sequence of bacteriophage BUCT660, which comprises a linear double-stranded DNA (dsDNA) genome of 272,720 bp and a G+C content of 47%. BUCT660 contains 316 open reading frames and 2 tRNA-encoding genes. The results of transmission electron microscopy (TEM) indicate that BUCT660 is a member of the family .

摘要

在此,我们报告噬菌体BUCT660的完整基因组序列,其由一个272,720 bp的线性双链DNA(dsDNA)基因组组成,G+C含量为47%。BUCT660包含316个开放阅读框和2个编码tRNA的基因。透射电子显微镜(TEM)结果表明BUCT660是该家族的一员。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0434/9387219/e1d274dc995f/mra.00406-22-f001.jpg

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本文引用的文献

1
Evaluation of a high-throughput, cost-effective Illumina library preparation kit.
Sci Rep. 2021 Aug 5;11(1):15925. doi: 10.1038/s41598-021-94911-0.
2
Characterization and genome sequence of the genetically unique Escherichia bacteriophage vB_EcoM_IME392.
Arch Virol. 2021 Sep;166(9):2505-2520. doi: 10.1007/s00705-021-05160-5. Epub 2021 Jul 8.
3
Biochemical and genomic characterization of a novel bacteriophage BUCT555 lysing Stenotrophomonas maltophilia.
Virus Res. 2021 Aug;301:198465. doi: 10.1016/j.virusres.2021.198465. Epub 2021 May 28.
4
Isolation and characterization of Vibrio parahaemolyticus bacteriophage vB_VpaS_PG07.
Virus Res. 2020 Sep;286:198080. doi: 10.1016/j.virusres.2020.198080. Epub 2020 Jun 29.
5
Sequence Similarity Searching.
Curr Protoc Protein Sci. 2019 Feb;95(1):e71. doi: 10.1002/cpps.71. Epub 2018 Aug 13.
7
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
[Serratia marcescens].
Rev Chilena Infectol. 2010 Jun;27(3):209-10. Epub 2010 Jul 29.
10
The RAST Server: rapid annotations using subsystems technology.
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.

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