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来自中国东海的(1782年,霍特图恩)线粒体基因组组装与系统发育分析。

Mitochondrial genome assembly and phylogenetic analysis of (Houttuyn, 1782) from the East China Sea.

作者信息

Wang Li, Wang Shouqiang, Lin Ye, Liu Shenghao, Liang Panjiao, Zhao Linlin

机构信息

School of Municipal and Environmental Engineering, Shenyang Jianzhu University, Shenyang, China.

Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China.

出版信息

Mitochondrial DNA B Resour. 2022 Jul 18;7(7):1308-1309. doi: 10.1080/23802359.2022.2095939. eCollection 2022.

Abstract

The mitochondrial genome of was successfully assembled by high-throughput sequencing data in this study. This is the first report on the complete mitochondrial genome of , with a total length of 16,535 bp, including 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and a control region (D-loop). The overall base composition is 26.05% A, 26.10% T, 29.14% C, and 18.71% G. Phylogenetic analysis showed that was grouped with its sister species . The mitochondrial complete genome study of would lay the foundation for further studies in population genetics and evolutionary analysis.

摘要

本研究通过高通量测序数据成功组装了[物种名称]的线粒体基因组。这是关于[物种名称]完整线粒体基因组的首次报道,全长16,535 bp,包括13个蛋白质编码基因(PCGs)、两个核糖体RNA基因(rRNAs)、22个转运RNA基因(tRNAs)和一个控制区(D-loop)。总体碱基组成为26.05%的A、26.10%的T、29.14%的C和18.71%的G。系统发育分析表明,[物种名称]与其姊妹物种[物种名称]聚为一类。[物种名称]的线粒体全基因组研究将为种群遗传学和进化分析的进一步研究奠定基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/52b6/9295816/1aa59e8fdcdc/TMDN_A_2095939_F0001_B.jpg

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