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NEAT1/MALAT1/XIST/PKD--人源微小RNA-101-3p--DLGAP5轴作为一种与膀胱癌免疫细胞浸润相关的新型诊断和预后生物标志物

NEAT1/MALAT1/XIST/PKD--Hsa-Mir-101-3p--DLGAP5 Axis as a Novel Diagnostic and Prognostic Biomarker Associated With Immune Cell Infiltration in Bladder Cancer.

作者信息

Rao Xiaosheng, Cao Haiyan, Yu Qingfeng, Ou Xiuyu, Deng Ruiqi, Huang Jinkun

机构信息

Department of Urology, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China.

Department of Nephrology, Tianjin Medical University General Hospital, Tianjin, China.

出版信息

Front Genet. 2022 Jul 8;13:892535. doi: 10.3389/fgene.2022.892535. eCollection 2022.

Abstract

The clinical value of the biomarkers of bladder cancer (BC) is limited due to their low sensitivity or specificity. As a biomarker, DLG associated protein 5 (DLGAP5) is a potential cell cycle regulator in cancer cell carcinogenesis. However, its functional part in BC remains unclear. Therefore, this study aims to identify DLGAP5 expression in BC and its potential diagnostic and prognostic values. Eventually, it predicts the possible RNA regulatory pathways of BC. Data on DLGAP5 expression levels in BC and normal bladder tissues were obtained from The Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO) databases. The receiver operating characteristic (ROC), Kaplan-Meier survival curves, and the univariate and multivariate Cox regression analysis determined the diagnostic and prognostic values of DLGAP5 in BC patients. Finally, the StarBase predicted the target RNAs and constructed networks using Cytoscape. DLGAP5 expression was significantly upregulated in BC tissue, verified by the TCGA ( < 0.001), GSE3167, GSE7476, and GSE65635 datasets ( < 0.01). BC patients with increased DLGAP5 had poor overall survival (OS) ( = 0.01), disease specific survival (DSS) ( = 0.006) and progress free interval (DFI) ( = 0.007). The area under the ROC curve (AUC) was 0.913. The multivariate Cox analysis identified that lymphovascular invasion ( = 0.007) and DLGAP5 ( = 0.002) were independent prognostic factors. Increased DLGAP5 expression was closely associated with a poor prognosis in BC patients. In this case, DLGAP5 might be a diagnostic and prognostic biomarker for BC. DLGAP5 expression might be regulated by NEAT1/MALAT1/XIST/PKD--Hsa-mir-101-3p pathways.

摘要

由于膀胱癌(BC)生物标志物的敏感性或特异性较低,其临床价值有限。作为一种生物标志物,盘状蛋白结构域结合蛋白5(DLGAP5)是癌细胞致癌过程中一种潜在的细胞周期调节因子。然而,其在BC中的功能作用仍不清楚。因此,本研究旨在确定DLGAP5在BC中的表达及其潜在的诊断和预后价值。最终,预测BC可能的RNA调控途径。从癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)获取BC和正常膀胱组织中DLGAP5表达水平的数据。通过受试者工作特征(ROC)曲线、Kaplan-Meier生存曲线以及单因素和多因素Cox回归分析确定DLGAP5在BC患者中的诊断和预后价值。最后,利用StarBase预测靶RNA,并使用Cytoscape构建网络。经TCGA(<0.001)、GSE3167、GSE7476和GSE65635数据集(<0.01)验证,DLGAP5在BC组织中的表达显著上调。DLGAP5升高的BC患者总生存期(OS)较差(=0.01)、疾病特异性生存期(DSS)较差(=0.006)和无进展生存期(DFI)较差(=0.0

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d543/9305813/aadf032c0787/fgene-13-892535-g001.jpg

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