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达欣纳卡纳达区芒格洛尔地区红树林土壤中作为抗菌肽来源的牛链霉菌的存在情况。

Occurrence of Streptomyces tauricus in mangrove soil of Mangalore region in Dakshina Kannada as a source for antimicrobial peptide.

作者信息

Karthik Yalpi, Kalyani Manjula Ishwara

机构信息

Department of Studies and Research in Microbiology, Mangalore University, Jnana Kaveri Campus, Chikka Aluvara, Kodagu, Karnataka, India.

出版信息

J Basic Microbiol. 2023 Mar;63(3-4):389-403. doi: 10.1002/jobm.202200108. Epub 2022 Jul 25.

Abstract

Microbial resistance and deprivation of the effective drugs have become the foremost problem that propels to seek out for advanced approach. This concept initiated a need to search for more effective antimicrobial compounds from reliable sources. The Streptomyces is grouped under phylum Actinobacteria and are considered prolific producers of antibiotics, around 70% of presently available antibiotics are contributed by Streptomyces alone. In this study, Mangroves of the Mangalore Coast offered a unique source for screening Actinomyces group of microorganisms. We investigated on the four soil samples collected from Mangrove swamps of Mangalore, Karnataka, India. Based on their culture traits, the 18 distinct Actinomyces isolates were analyzed through a series of morphological and biochemical tests on starch casein nitrate (SCN) media. Culture biomasses were subjected for intracellular protein extraction through acetone precipitation method; the extracted proteins from each Actinomyces isolate were examined for antimicrobial activity against test organisms. The isolate ANTB-YKMU4 showed potential antimicrobial activity against significant number of test organisms; Bacillus cereus, Proteus vulgaris, Staphylococcus aureus, Salmonella typhimurium, and Pseudomonas aeruginosa. The isolate ANTB-YKMU4 through 16 s rRNA gene sequence analysis was identified as Streptomyces tauricus strain with GenBank accession no. MW785875.1. The S. tauricus further cultivated for efficient biomass growth on SCN media for subsequent protein extraction and purification by a series of Electrophoretic and chromatographic techniques. Thus, by intracellular extractions from S. tauricus resulted in the identification of peptide with a molecular weight of 266 Da that was characterized by LC-MS.

摘要

微生物耐药性以及有效药物的匮乏已成为推动寻求先进方法的首要问题。这一概念引发了从可靠来源寻找更有效抗菌化合物的需求。链霉菌属于放线菌门,被认为是抗生素的多产生产者,目前约70%的可用抗生素仅由链霉菌贡献。在本研究中,芒格洛尔海岸的红树林为筛选放线菌微生物群提供了独特来源。我们对从印度卡纳塔克邦芒格洛尔的红树林沼泽采集的四个土壤样本进行了研究。基于它们的培养特性,通过在淀粉酪蛋白硝酸盐(SCN)培养基上进行的一系列形态学和生化测试,对18种不同的放线菌分离株进行了分析。通过丙酮沉淀法对培养生物量进行细胞内蛋白质提取;检查从每种放线菌分离株中提取的蛋白质对测试生物体的抗菌活性。分离株ANTB - YKMU4对大量测试生物体表现出潜在的抗菌活性;蜡样芽孢杆菌、普通变形杆菌、金黄色葡萄球菌、鼠伤寒沙门氏菌和铜绿假单胞菌。通过16 s rRNA基因序列分析,分离株ANTB - YKMU4被鉴定为金牛座链霉菌菌株,GenBank登录号为MW785875.1。在SCN培养基上进一步培养金牛座链霉菌以实现高效生物量增长,随后通过一系列电泳和色谱技术进行蛋白质提取和纯化。因此,通过从金牛座链霉菌进行细胞内提取,鉴定出了一种分子量为266 Da的肽,该肽通过液相色谱 - 质谱联用进行了表征。

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