Department of Microbiology, Immunology and Parasitology, St. Paul's Hospital Millennium Medical College, Addis Ababa P.O. Box 1271, Ethiopia.
Department of Internal Medicine, Jimma University, Jimma P.O. Box 378, Ethiopia.
Int J Environ Res Public Health. 2022 Jul 12;19(14):8515. doi: 10.3390/ijerph19148515.
Wastewater surveillance systems have become an important component of COVID-19 outbreak monitoring in high-income settings. However, its use in most low-income settings has not been well-studied. This study assessed the feasibility and utility of wastewater surveillance system to monitor SARS-CoV-2 RNA in Addis Ababa, Ethiopia. The study was conducted at nine Membrane Bio-reactor (MBR) wastewater processing plants. The samples were collected in two separate time series. Wastewater samples and known leftover RT-PCR tested nasopharyngeal swabs were processed using two extraction protocols with different sample conditions. SARS-CoV-2 wastewater RT-PCR testing was conducted using RIDA GENE SARS-CoV-2 RUO protocol for wastewater SARS-CoV-2 RNA testing. Wastewater SARS-CoV-2 RNA RT-PCR protocol adaptation, optimization, and detection were conducted in an Addis Ababa, Ethiopia context. Samples collected during the first time series, when the national COVID-19 case load was low, were all negative. Conversely, samples collected during the second time series were all positive, coinciding with the highest daily reported new cases of COVID-19 in Ethiopia. The wastewater-based SARS-CoV-2 surveillance approach is feasible for Addis Ababa. The COVID-19 wastewater based epidemiological approach can potentially fill the evidence gap in distribution and dynamics of COVID-19 in Ethiopia and other low-income settings.
污水监测系统已成为高收入国家 COVID-19 疫情监测的重要组成部分。然而,其在大多数低收入国家的应用尚未得到充分研究。本研究评估了污水监测系统在埃塞俄比亚亚的斯亚贝巴监测 SARS-CoV-2 RNA 的可行性和实用性。该研究在九个膜生物反应器(MBR)污水处理厂进行。样品分两个独立的时间序列采集。使用两种不同样本条件的提取方案对污水样本和已知剩余的 RT-PCR 测试鼻咽拭子进行处理。使用 RIDA GENE SARS-CoV-2 RUO 协议进行污水 SARS-CoV-2 RNA 测试的废水 SARS-CoV-2 RT-PCR 测试。在埃塞俄比亚亚的斯亚贝巴的背景下,对污水 SARS-CoV-2 RNA RT-PCR 方案进行了适应、优化和检测。在第一个时间序列采集的样本中,当全国 COVID-19 病例数较低时,所有样本均为阴性。相反,在第二个时间序列采集的样本均为阳性,与埃塞俄比亚报告的 COVID-19 每日新增病例数最高的时期相吻合。基于污水的 SARS-CoV-2 监测方法在亚的斯亚贝巴是可行的。基于 COVID-19 污水的流行病学方法有可能填补埃塞俄比亚和其他低收入国家 COVID-19 分布和动态的证据空白。