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基于 16S rRNA 基因测序的宏基因组分析对腺样体微生物组的概述。

An Overview of Adenoid Microbiome Using 16S rRNA Gene Sequencing-Based Metagenomic Analysis.

机构信息

Department of Otorhinolaryngology, Medical Faculty, Rīga Stradiņš University, 16 Dzirciema Str., LV-1007 Rīga, Latvia.

AIWA Clinic, 241 Maskavas Str., LV-1019 Rīga, Latvia.

出版信息

Medicina (Kaunas). 2022 Jul 11;58(7):920. doi: 10.3390/medicina58070920.

Abstract

: the upper respiratory tract harbors the highest bacterial density in the whole respiratory system. Adenoids, which are located in the , are a major site of bacterial colonies in the upper airways. Our goal was to use culture-independent molecular techniques to identify the breadth of bacterial diversity in the adenoid vegetations of children suffering from chronic rhinosinusitis and obstructive sleep apnea. : in total, 21 adenoid samples were investigated using amplification and sequencing of the V3-V4 hypervariable region of the bacterial 16S rRNA gene. : among the most common bacterial species found were , , , and . and dominated the microbiome in all 21 samples, attributing to more than 60% of all detected genetic material. : since both and are, predominantly, oral cavity and dental microorganisms, our findings may suggest oral microbiome migration deeper into the oropharynx and nasopharynx where these bacteria colonize adenoid vegetations.

摘要

上呼吸道拥有整个呼吸系统中最高的细菌密度。腺样体位于 ,是上呼吸道细菌菌落的主要部位。我们的目标是使用非培养的分子技术来鉴定患有慢性鼻-鼻窦炎和阻塞性睡眠呼吸暂停的儿童腺样体组织中细菌多样性的广度。总共使用扩增和测序细菌 16S rRNA 基因的 V3-V4 高变区对 21 个腺样体样本进行了研究。发现的最常见细菌种类包括 、 、 和 。 和 在所有 21 个样本中均占主导地位,占所有检测到的遗传物质的 60%以上。由于 和 主要是口腔和牙齿微生物,我们的研究结果可能表明口腔微生物组向口咽和鼻咽更深部迁移,这些细菌在那里定植于腺样体组织。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7e8/9318310/c1c8e1134800/medicina-58-00920-g001.jpg

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