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鉴定和验证 m7G 相关 lncRNAs 标志物用于子宫内膜癌的预后预测和免疫功能分析。

Identification and Validation of an m7G-Related lncRNAs Signature for Prognostic Prediction and Immune Function Analysis in Endometrial Cancer.

机构信息

Department of Gynecology, Shanghai First Maternity and Infant Hospital, School of Medicine, Tongji University, Shanghai 200092, China.

出版信息

Genes (Basel). 2022 Jul 22;13(8):1301. doi: 10.3390/genes13081301.

Abstract

BACKGROUND

N7-methylguanosine is a novel kind of internal modification that is widespread in human mRNA. The relationship between m7G-related lncRNAs (MRL) and endometrial cancer remains unknown. The aim of our study is to explore a predictive prognosis MRL signature in endometrial cancer and identify the underlying biological mechanism.

METHODS

We obtained RNA-seq profiles, clinical data, and information on somatic mutations from the TCGA database and obtained m7G-related genes from a previous study. MRLs were identified through a co-expression network. The prognostic model was constructed based on 10 m7G-related lncRNAs. Differentially expressed genes between low- and high-risk groups were identified for further analysis, consisting of functional enrichment analysis, immune function analysis, somatic mutation analysis, and potential drugs exploration.

RESULTS

We constructed a 10-MRLs signature. According to the risk score, the signature was classified into high- and low-risk groups. The signature had a reliable capacity for predicting the prognosis of endometrial cancer patients. The findings about differentially expressed genes were also of great significance for therapeutic treatments for endometrial cancer and gave novel insights into exploring the underlying molecular mechanism.

CONCLUSION

The prognostic model based on 10 MRLs is a reliable and promising approach for predicting clinical outcomes and suggesting therapeutic methods for endometrial cancer patients.

摘要

背景

N7-甲基鸟苷是一种新型的内修饰,广泛存在于人类 mRNA 中。m7G 相关长非编码 RNA(MRL)与子宫内膜癌之间的关系尚不清楚。本研究旨在探讨子宫内膜癌中具有预测预后的 MRL 特征,并鉴定其潜在的生物学机制。

方法

我们从 TCGA 数据库中获取了 RNA-seq 图谱、临床数据和体细胞突变信息,并从之前的研究中获得了 m7G 相关基因。通过共表达网络鉴定 MRL。基于 10 个 m7G 相关 lncRNA 构建了预后模型。进一步分析高低风险组之间的差异表达基因,包括功能富集分析、免疫功能分析、体细胞突变分析和潜在药物探索。

结果

我们构建了一个 10-MRLs 特征。根据风险评分,该特征将患者分为高风险和低风险组。该特征能够可靠地预测子宫内膜癌患者的预后。差异表达基因的发现对子宫内膜癌的治疗也具有重要意义,并为探索潜在的分子机制提供了新的见解。

结论

基于 10 个 MRL 的预后模型是一种可靠且有前途的方法,可以预测子宫内膜癌患者的临床结局并为其提供治疗方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a444/9330151/3dc7f840d15a/genes-13-01301-g001.jpg

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