Mechanobiology Institute, National University of Singapore, Singapore, Singapore.
Department of Biomedical Engineering, National University of Singapore, Singapore, Singapore.
Nat Protoc. 2022 Oct;17(10):2275-2306. doi: 10.1038/s41596-022-00717-3. Epub 2022 Jul 27.
The spatiotemporal aspects of early signaling events during interactions between cells and their environment dictate multiple downstream outcomes. While advances in nanopatterning techniques have allowed the isolation of these signaling events, a major limitation of conventional nanopatterning methods is its dependence on gold (Au) or related materials that plasmonically quench fluorescence and, thus, are incompatible with super-resolution fluorescence microscopy. Here we describe a novel method that integrates nanopatterning with single-molecule resolution fluorescence imaging, thus enabling mechanistic dissection of molecular-scale signaling events in conjunction with nanoscale geometry manipulation. Our method exploits nanofabricated titanium (Ti) whose oxide (TiO) is a dielectric material with no plasmonic effects. We describe the surface chemistry for decorating specific ligands such as cyclo-RGD (arginine, glycine and aspartate: a ligand for fibronectin-binding integrins) on TiO nanoline and nanodot substrates, and demonstrate the ability to perform dual-color super-resolution imaging on these patterns. Ti nanofabrication is similar to other metallic materials like Au, while the functionalization of TiO is relatively fast, safe, economical, easy to set up with commonly available reagents, and robust against environmental parameters such as humidity. Fabrication of nanopatterns takes ~2-3 d, preparation for functionalization ~1.5-2 d, and functionalization 3 h, after which cell culture and imaging experiments can be performed. We suggest that this method may facilitate the interrogation of nanoscale geometry and force at single-molecule resolution, and should find ready applications in early detection and interpretation of physiochemical signaling events at the cell membrane in the fields of cell biology, immunology, regenerative medicine, and related fields.
细胞与其环境相互作用过程中早期信号事件的时空方面决定了多种下游结果。虽然纳米图案化技术的进步使得这些信号事件得以分离,但传统纳米图案化方法的一个主要局限性是依赖于金(Au)或相关材料,这些材料会使荧光猝灭,因此与超分辨率荧光显微镜不兼容。在这里,我们描述了一种将纳米图案化与单分子分辨率荧光成像相结合的新方法,从而能够结合纳米级几何形状操作来对分子尺度的信号事件进行机制剖析。我们的方法利用了纳米制造的钛(Ti),其氧化物(TiO)是一种没有等离子体效应的介电材料。我们描述了在 TiO 纳米线和纳米点基底上修饰特定配体(如环-RGD(精氨酸、甘氨酸和天冬氨酸:纤维连接蛋白结合整联蛋白的配体)的表面化学,并展示了在这些图案上进行双色超分辨率成像的能力。Ti 纳米制造类似于 Au 等其他金属材料,而 TiO 的功能化相对较快、安全、经济、易于使用常见试剂进行设置,并且对湿度等环境参数具有鲁棒性。纳米图案的制造需要大约 2-3 天,功能化准备需要 1.5-2 天,功能化需要 3 小时,之后可以进行细胞培养和成像实验。我们建议该方法可以促进单分子分辨率的纳米级几何形状和力的探测,并且应该在细胞生物学、免疫学、再生医学和相关领域中细胞膜的物理化学信号事件的早期检测和解释方面得到广泛应用。