Department of Pharmaceutical Sciences, School of Pharmacy, Northeastern University, Boston, MA 02115, USA.
Lab Chip. 2022 Aug 23;22(17):3258-3267. doi: 10.1039/d2lc00435f.
Most common methods of cellular analysis employ the top-down approach (investigating proteomics or genomics directly), thereby destroying the cell, which does not allow the possibility of using the same cell to correlate genomics with functional assays. Herein we describe an approach for single-cell tools that serve as a bottom-up approach. Our technology allows functional phenotyping to be conducted by observing the cytotoxicity of cells and then probe the underlying biology. We have developed a droplet microfluidic device capable of trapping droplets in the array and releasing the droplet of interest selectively using microvalves. Each droplet in the array encapsulates natural killer cells (NK cells) and tumour cells for real-time monitoring of burst kinetics and spatial coordination during killing by single NK cells. Finally, we use the microvalve actuation to selectively release droplets with the desired functional phenotype such as for fast and serial killing of target tumour cells by NK cells. From this perspective, our device allows for investigating first interactions and real-time monitoring of kinetics and later cell recovery on demand for single-cell omic analysis such as single-cell RNA sequencing (scRNA), which to date, is primarily based on in-depth analyses of the entire transcriptome of a relatively low number of cells.
大多数常见的细胞分析方法采用自上而下的方法(直接研究蛋白质组学或基因组学),从而破坏细胞,这使得不可能使用同一细胞将基因组学与功能测定相关联。本文描述了一种用于单细胞工具的方法,作为一种自下而上的方法。我们的技术允许通过观察细胞的细胞毒性来进行功能表型分析,然后探测潜在的生物学。我们开发了一种液滴微流控设备,能够在阵列中捕获液滴,并使用微阀选择性地释放感兴趣的液滴。阵列中的每个液滴都包含自然杀伤细胞 (NK 细胞) 和肿瘤细胞,用于实时监测单个 NK 细胞杀伤过程中的爆发动力学和空间协调。最后,我们使用微阀致动来选择性地释放具有所需功能表型的液滴,例如 NK 细胞快速连续杀伤靶肿瘤细胞。从这个角度来看,我们的设备允许研究首次相互作用,并实时监测动力学,然后根据需要对单个细胞进行恢复以进行单细胞分析,例如单细胞 RNA 测序 (scRNA),迄今为止,这主要基于对相对少量细胞的整个转录组的深入分析。