Kristanti Alfinda Novi, Aminah Nanik Siti, Siswanto Imam, Manuhara Yosephine Sri Wulan, Abdjan Muhammad Ikhlas, Wardana Andika Pramudya, Aung Ei Ei, Takaya Yoshiaki
Departement of Chemistry, Faculty of Science and Technology, Universitas Airlangga Surabaya 60115 Indonesia
Biotechnology of Tropical Medicinal Plants Research Group, Universitas Airlangga Indonesia.
RSC Adv. 2022 Jul 13;12(31):20319-20329. doi: 10.1039/d2ra03092f. eCollection 2022 Jul 6.
The human estrogenic enzyme 17beta-hydroxysteroid dehydrogenase type-1 (HSD17B1) provides biosynthesis regulation of active estrogen in stimulating the development of breast cancer through cell proliferation. The β-sitosterol is classified as a steroid compound and is actually a type of triterpenoid compound that has a similar structure to a steroid. This similarity provides a great opportunity for the inhibitor candidate to bind to the HDS17B1 enzyme because of the template similarity on the active site. Several approaches have been applied in this study to examine the potential of these two inhibitor candidates. Pharmacokinetic studies showed positive results by meeting several drug candidate criteria, such as drug-likeness, bioavailability, and ADMET properties. A combination of molecular docking and MD simulation showed good conformational interaction of the inhibitors and HSD17B1. Prediction of binding free energy (Δ ) using the Molecular Mechanics-Generalized Born Surface Area (MM-GBSA) approach shows Δ (kcal mol) of C1-HSD17B1: -49.31 ± 0.23 and C2-HSD17B1: -33.54 ± 0.34. Meanwhile, decomposition energy analysis (Δ ) suggested several key residues that were also responsible for the interaction with inhibitors, such as C1-HSD17B1 (six residues: Leu96, Leu149, Pro187, Met193, Val225, and Phe226) and C2-HSD17B1 (four residues: Ile14, Gly94, Pro187, and Val188). Hopefully, the obtained results from this research could be considered for the mechanistic inhibition of the HSDS17B1 enzyme at molecular and atomistic levels.
人类雌激素酶17β-羟基类固醇脱氢酶1型(HSD17B1)通过细胞增殖来调节活性雌激素的生物合成,从而刺激乳腺癌的发展。β-谷甾醇被归类为类固醇化合物,实际上是一种三萜类化合物,其结构与类固醇相似。由于活性位点上的模板相似性,这种相似性为抑制剂候选物与HDS17B1酶结合提供了绝佳机会。本研究采用了几种方法来检验这两种抑制剂候选物的潜力。药代动力学研究通过满足几种药物候选标准,如类药性、生物利用度和ADMET性质,显示出阳性结果。分子对接和分子动力学模拟相结合显示抑制剂与HSD17B1具有良好的构象相互作用。使用分子力学-广义玻恩表面积(MM-GBSA)方法预测结合自由能(Δ )显示,C1-HSD17B1的Δ (千卡/摩尔)为-49.31±0.23,C2-HSD17B1的Δ 为-33.54±0.34。同时,分解能分析(Δ )表明几个关键残基也参与了与抑制剂的相互作用,如C1-HSD17B1(六个残基:Leu96、Leu149、Pro187、Met193、Val225和Phe)和C2-HSD17B1(四个残基:Ile(此处原文有误,应是Ile14)、Gly94、Pro187和Val188)。希望本研究获得的结果可用于在分子和原子水平上对HSDS17B1酶进行机制性抑制的研究。