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密歇根奥布赖恩肾脏研究中心:通过系统生物学推动转化性肾脏研究。

The Michigan O'Brien Kidney Research Center: transforming translational kidney research through systems biology.

机构信息

Division of Nephrology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.

Division of Pediatric Nephrology, Department of Pediatrics, University of Michigan, Ann Arbor, Michigan.

出版信息

Am J Physiol Renal Physiol. 2022 Oct 1;323(4):F401-F410. doi: 10.1152/ajprenal.00091.2022. Epub 2022 Aug 4.

Abstract

Research on kidney diseases is being transformed by the rapid expansion and innovations in omics technologies. The analysis, integration, and interpretation of big data, however, have been an impediment to the growing interest in applying these technologies to understand kidney function and failure. Targeting this urgent need, the University of Michigan O'Brien Kidney Translational Core Center (MKTC) and its Administrative Core established the Applied Systems Biology Core. The Core provides need-based support for the global kidney community centered on enabling incorporation of systems biology approaches by creating web-based, user-friendly analytic and visualization tools, like Nephroseq and Nephrocell, guiding with experimental design, and processing, analysis, and integration of large data sets. The enrichment core supports systems biology education and dissemination through workshops, seminars, and individualized training sessions. Meanwhile, the Pilot and Feasibility Program of the MKTC provides pilot funding to both early-career and established investigators new to the field, to integrate a systems biology approach into their research projects. The relevance and value of the portfolio of training and services offered by MKTC are reflected in the expanding community of young investigators, collaborators, and users accessing resources and engaging in systems biology-based kidney research, thereby motivating MKTC to persevere in its mission to serve the kidney research community by enabling access to state-of-the-art data sets, tools, technologies, expertise, and learning opportunities for transformative basic, translational, and clinical studies that will usher in solutions to improve the lives of people impacted by kidney disease.

摘要

肾脏疾病的研究正在受到组学技术的快速扩展和创新的推动。然而,大数据的分析、整合和解释一直是将这些技术应用于理解肾脏功能和衰竭的日益增长的兴趣的障碍。为了满足这一紧迫需求,密歇根大学奥布赖恩肾脏转化核心中心 (MKTC) 及其行政核心成立了应用系统生物学核心。该核心通过创建基于网络的、用户友好的分析和可视化工具,如 Nephroseq 和 Nephrocell,为全球肾脏社区提供基于需求的支持,这些工具指导实验设计,并处理、分析和整合大型数据集,从而使系统生物学方法的应用成为可能。富集核心通过研讨会、研讨会和个性化培训课程支持系统生物学教育和传播。与此同时,MKTC 的试点和可行性计划为该领域的新的早期职业和已建立的研究人员提供试点资金,以将系统生物学方法整合到他们的研究项目中。MKTC 提供的培训和服务组合的相关性和价值反映在不断扩大的年轻研究人员、合作者和用户群体中,他们正在访问资源并参与基于系统生物学的肾脏研究,从而激励 MKTC 坚持其使命,通过提供先进的数据集、工具、技术、专业知识和学习机会,为变革性的基础、转化和临床研究服务,为改善受肾脏疾病影响的人们的生活带来解决方案。

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