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FAM83家族的泛癌分析及其与预后和肿瘤微环境的关联

Pan-cancer analysis of the FAM83 family and its association with prognosis and tumor microenvironment.

作者信息

Yuan Shangkun, Huang Zhisheng, Qian Xiaoying, Wang Yong, Fang Chen, Chen Renfang, Zhang Xinwei, Xiao Zhehao, Wang Qian, Yu Biao, Li Yong

机构信息

Department of Medical Oncology, The First Affiliated Hospital of Nanchang University, Nanchang, China.

Medical Innovation Center, The First Affiliated Hospital of Nanchang University, Nanchang, China.

出版信息

Front Genet. 2022 Jul 22;13:919559. doi: 10.3389/fgene.2022.919559. eCollection 2022.

Abstract

Family with sequence similarity 83 (FAM83) is a newly identified family of oncogenes whose members play important roles in signaling and cancer progression. However, a thorough understanding of the FAM83 family in tumors is still lacking. Here, we performed a comprehensive analysis of the expression levels of the FAM83 family across cancers and patient prognoses using bioinformatics methods. We found that the expression levels of FAM83 family genes were upregulated in most tumors, and importantly, high expression levels of FAM83 family genes were related to poor prognosis in most tumors. In addition, we analyzed the relationship of FAM83 family genes with immune subtypes and the tumor microenvironment (TME). The results showed that FAM83 family genes were significantly associated with immune infiltrative subtypes and to varying degrees with the level of stromal cell infiltration and tumor stem cells. Finally, our study also showed the relationship between FAM83 family genes and drug sensitivity. Therefore, this pan-cancer analysis demonstrates the critical role of FAM83 family genes in tumor development and provides new clues for therapeutic strategies for cancer.

摘要

序列相似性83家族(FAM83)是一个新发现的癌基因家族,其成员在信号传导和癌症进展中发挥重要作用。然而,目前对肿瘤中FAM83家族仍缺乏全面的了解。在此,我们使用生物信息学方法对FAM83家族在各种癌症中的表达水平及患者预后进行了综合分析。我们发现,FAM83家族基因的表达水平在大多数肿瘤中上调,重要的是,FAM83家族基因的高表达水平与大多数肿瘤的不良预后相关。此外,我们分析了FAM83家族基因与免疫亚型及肿瘤微环境(TME)的关系。结果表明,FAM83家族基因与免疫浸润亚型显著相关,并在不同程度上与基质细胞浸润水平和肿瘤干细胞相关。最后,我们的研究还显示了FAM83家族基因与药物敏感性之间的关系。因此,这项泛癌分析证明了FAM83家族基因在肿瘤发展中的关键作用,并为癌症治疗策略提供了新线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fdc/9353330/13777c4504e5/fgene-13-919559-g001.jpg

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