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联合配体和结构的虚拟筛选,以评估小分子有机化合物作为 XIAP 抗凋亡蛋白抑制剂:黄腐酚假说。

Ligand and Structure-Based Virtual Screening in Combination, to Evaluate Small Organic Molecules as Inhibitors for the XIAP Anti-Apoptotic Protein: The Xanthohumol Hypothesis.

机构信息

Department of Life & Health Sciences, University of Nicosia, Nicosia 2417, Cyprus.

出版信息

Molecules. 2022 Jul 28;27(15):4825. doi: 10.3390/molecules27154825.

DOI:10.3390/molecules27154825
PMID:35956774
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9369490/
Abstract

Herein, we propose two chalcone molecules, (E)-1-(4-methoxyphenyl)-3-(p-tolyl) prop-2-en-1-one and (E)-3-(4-hydroxyphenyl)-1-(2,4,6-trihydroxyphenyl) prop-2-en-1-one, based on the anticancer bioactive molecule Xanthohumol, which are suitable for further in vitro and in vivo studies. Their ability to create stable complexes with the antiapoptotic X-linked IAP (XIAP) protein makes them promising anticancer agents. The calculations were based on ligand-based and structure-based virtual screening combined with the pharmacophore build. Additionally, the structures passed Lipinski's rule for drug use, and their reactivity was confirmed using density functional theory studies. ADMET studies were also performed to reveal the pharmacokinetic potential of the compounds. The candidates were chosen from 10,639,400 compounds, and the docking protocols were evaluated using molecular dynamics simulations.

摘要

在此,我们提出了两种查尔酮分子,(E)-1-(4-甲氧基苯基)-3-(对甲苯基)-2-丙烯-1-酮和(E)-3-(4-羟基苯基)-1-(2,4,6-三羟基苯基)-2-丙烯-1-酮,它们基于具有抗癌生物活性的分子黄腐酚,适合进一步的体外和体内研究。它们与抗凋亡的 X 连锁凋亡抑制蛋白(XIAP)蛋白形成稳定复合物的能力使它们成为有前途的抗癌药物。这些计算是基于基于配体的和基于结构的虚拟筛选与药效团构建相结合的。此外,还使用密度泛函理论研究证实了其反应性。还进行了 ADMET 研究以揭示化合物的药代动力学潜力。从 10639400 种化合物中选择了候选物,并使用分子动力学模拟评估了对接方案。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/7dacc411de98/molecules-27-04825-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/b79595124094/molecules-27-04825-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/20813f33e0c9/molecules-27-04825-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/b7e859aadd06/molecules-27-04825-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/ea2237650a40/molecules-27-04825-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/5e4bfcc8184f/molecules-27-04825-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/31149b6a7ec5/molecules-27-04825-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/77fd2f9981aa/molecules-27-04825-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/7dacc411de98/molecules-27-04825-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/b79595124094/molecules-27-04825-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/20813f33e0c9/molecules-27-04825-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/b7e859aadd06/molecules-27-04825-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/ea2237650a40/molecules-27-04825-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/5e4bfcc8184f/molecules-27-04825-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/31149b6a7ec5/molecules-27-04825-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/77fd2f9981aa/molecules-27-04825-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a7f3/9369490/7dacc411de98/molecules-27-04825-g008.jpg

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