Wei Ruda, Chen Liting, Li Pengchuan, Lin Chaoyang, Zeng Qingshi
Hebei North University Zhangjiakou 075000, Hebei, P. R. China.
Department of Cardiovascular Medicine, Air force Medical Center, PLA Beijing 100142, P. R. China.
Am J Transl Res. 2022 Jul 15;14(7):4573-4590. eCollection 2022.
Idiopathic pulmonary arterial hypertension (IPAH) is characterized by medial hypertrophy due to pulmonary artery smooth muscle cell (PASMC) hyperplasia. In the present study, we conducted bioinformatic analyses and cellular experiments to assess the involvement of the interleukin-13 (IL-13) in IPAH.
The differentially expressed genes (DEGs) in IPAH and DEGs in IPAH caused by IL-13 treatment were screened using the GEO database. PPI networks were used to analyze the hub genes. Hypoxia-induced PASMCs were treated with IL-13 for assays. CCK8 and EdU staining were used to observe proliferation of PASMCs, and RT-qPCR was applied to detect the expression of hub genes. The conserved binding sites of microRNAs (miRNAs) in the 3'UTR of hub genes were investigated, and the regulatory relationships of the relevant miRNAs on their targets were verified by RT-qPCR and dual-luciferase assays. The GO and KEGG analyses were performed to study the downstream pathways. The effect of hub genes on immune cell infiltration in IPAH was investigated.
IL-13 altered gene expression in IPAH. IL-13 inhibited the proliferation and the expression of hub genes in PASMCs. The 3'UTR sites between HNRNPA2B1, HNRNPH1, SRSF1, HNRNPU and HNRNPA3 in the hub genes and candidate regulatory miRNAs were well conserved in humans. IL-13-mediated hub genes regulated multiple pathways and influenced immune cell infiltration. Hypoxia-induced PASMCs promoted the M2 polarization of macrophages, whereas IL-13-treated PASMCs skewed the macrophages toward M1 polarization.
IL-13-mediated alterations in hub genes inhibit PASMC proliferation and promote M1 macrophage infiltration in IPAH.
特发性肺动脉高压(IPAH)的特征是由于肺动脉平滑肌细胞(PASMC)增生导致的中膜肥厚。在本研究中,我们进行了生物信息学分析和细胞实验,以评估白细胞介素-13(IL-13)在IPAH中的作用。
使用GEO数据库筛选IPAH中的差异表达基因(DEG)以及IL-13处理导致的IPAH中的DEG。利用蛋白质-蛋白质相互作用(PPI)网络分析枢纽基因。用IL-13处理缺氧诱导的PASMC进行实验。采用CCK8和EdU染色观察PASMC的增殖情况,并应用RT-qPCR检测枢纽基因的表达。研究枢纽基因3'非翻译区(UTR)中微小RNA(miRNA)的保守结合位点,并通过RT-qPCR和双荧光素酶测定验证相关miRNA对其靶标的调控关系。进行基因本体(GO)和京都基因与基因组百科全书(KEGG)分析以研究下游通路。研究枢纽基因对IPAH中免疫细胞浸润的影响。
IL-13改变了IPAH中的基因表达。IL-13抑制PASMC的增殖和枢纽基因的表达。枢纽基因中HNRNPA2B1、HNRNPH1、SRSF1、HNRNPU和HNRNPA3与候选调控miRNA之间的3'UTR位点在人类中高度保守。IL-13介导的枢纽基因调节多种通路并影响免疫细胞浸润。缺氧诱导的PASMC促进巨噬细胞的M2极化,而IL-13处理的PASMC使巨噬细胞向M1极化倾斜。
IL-13介导的枢纽基因改变抑制PASMC增殖并促进IPAH中M1巨噬细胞浸润。