Te Aka Mātuatua - School of Science, University of Waikato, Private Bag 3105, Hamilton, 3240, New Zealand.
Sci Rep. 2022 Aug 17;12(1):13987. doi: 10.1038/s41598-022-17937-y.
Biological invasions drive environmental change, potentially threatening native biodiversity, human health, and global economies. Population genomics is an increasingly popular tool in invasion biology, improving accuracy and providing new insights into the genetic factors that underpin invasion success compared to research based on a small number of genetic loci. We examine the extent to which population genomic resources, including reference genomes, have been used or are available for invasive species research. We find that 82% of species on the International Union for Conservation of Nature "100 Worst Invasive Alien Species" list have been studied using some form of population genetic data, but just 32% of these species have been studied using population genomic data. Further, 55% of the list's species lack a reference genome. With incursion rates escalating globally, understanding how genome-driven processes facilitate invasion is critical, but despite a promising trend of increasing uptake, "invasion genomics" is still in its infancy. We discuss how population genomic data can enhance our understanding of biological invasion and inform proactive detection and management of invasive species, and we call for more research that specifically targets this area.
生物入侵推动了环境变化,可能威胁到本地生物多样性、人类健康和全球经济。群体基因组学是入侵生物学中一种越来越流行的工具,与基于少数遗传位点的研究相比,它提高了准确性,并为支持入侵成功的遗传因素提供了新的见解。我们考察了群体基因组资源(包括参考基因组)在入侵物种研究中被使用或可利用的程度。我们发现,国际自然保护联盟“100 种最具破坏力的外来入侵物种”名单上的 82%的物种都曾使用某种形式的群体遗传数据进行过研究,但只有 32%的物种使用了群体基因组数据进行过研究。此外,该名单上的 55%的物种缺乏参考基因组。随着入侵率在全球范围内的上升,了解基因组驱动的过程如何促进入侵至关重要,但尽管采用率呈现出上升的趋势,“入侵基因组学”仍处于起步阶段。我们讨论了群体基因组数据如何增强我们对生物入侵的理解,并为主动探测和管理入侵物种提供信息,我们呼吁开展更多专门针对这一领域的研究。