如何使用念珠菌基因组数据库。
How to Use the Candida Genome Database.
机构信息
Department of Genetics, Stanford University, Stanford, CA, USA.
出版信息
Methods Mol Biol. 2022;2542:55-69. doi: 10.1007/978-1-0716-2549-1_4.
Abstract
The Candida Genome Database provides access to biological information about genes and proteins of several medically important Candida species. The website is organized into easily navigable pages that enable data retrieval and analysis. This chapter shows how to explore the CGD Home page and Locus Summary pages, which are the main access points to the database. It also provides a description of how to use the GO analysis tools, GO Term Finder, and GO Slim Mapper and how to browse large-scale datasets using the JBrowse genome browser. Finally, it shows how to search and retrieve data for user-defined sets of genes using the Advanced Search and Batch Download tools.
摘要
《念珠菌基因组数据库》提供了有关几种医学上重要的念珠菌属物种的基因和蛋白质的生物学信息。该网站组织成易于浏览的页面，使用户能够检索和分析数据。本章介绍如何浏览 CGD 主页和基因座摘要页面，这些是访问数据库的主要入口点。还提供了如何使用 GO 分析工具、GO 术语查找器和 GO 简约映射器以及如何使用 JBrowse 基因组浏览器浏览大规模数据集的说明。最后，展示了如何使用高级搜索和批量下载工具搜索和检索用户定义的基因集的数据。
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