Bio-Protection Research Centre, Lincoln University, Lincoln 7674, New Zealand.
Department of Entomology, Faculty of Agriculture Sciences & Technology, Bahauddin Zakariya University, Multan 60000, Pakistan.
Biomolecules. 2022 Aug 20;12(8):1154. doi: 10.3390/biom12081154.
The Gram-positive and spore-forming bacterium Brevibacillus laterosporus (Bl) belongs to the Brevibacillus brevis phylogenetic cluster. Isolates of the species have demonstrated pesticidal potency against a wide range of invertebrate pests and plant diseases. Two New Zealand isolates, Bl 1821L and Bl 1951, are under development as biopesticides for control of diamondback moth and other pests. However, due to the often-restricted growth of these endemic isolates, production can be an issue. Based on the previous work, it was hypothesised that the putative phages might be involved. During investigations of the cause of the disrupted growth, electron micrographs of crude lysate of Bl 1821L showed the presence of phages’ tail-like structures. A soft agar overlay method with PEG 8000 precipitation was used to differentiate between the antagonistic activity of the putative phage and phage tail-like structures (bacteriocins). Assay tests authenticated the absence of putative phage activity. Using the same method, broad-spectrum antibacterial activity of Bl 1821L lysate against several Gram-positive bacteria was found. SDS-PAGE of sucrose density gradient purified and 10 kD MWCO concentrated lysate showed a prominent protein band of ~48 kD, and transmission electron microscopy revealed the presence of polysheath-like structures. N-terminal sequencing of the ~48 kD protein mapped to a gene with weak predicted amino acid homology to a Bacillus PBSX phage-like element xkdK, the translated product of which shared >90% amino acid similarity to the phage tail-sheath protein of another Bl published genome, LMG15441. Bioinformatic analysis also identified an xkdK homolog in the Bl 1951 genome. However, genome comparison of the region around the xkdK gene between Bl 1821L and Bl 1951 found differences including two glycine rich protein encoding genes which contain imperfect repeats (1700 bp) in Bl 1951, while a putative phage region resides in the analogous Bl 1821L region. Although comparative analysis of the genomic organisation of Bl 1821L and Bl 1951 PBSX-like region with the defective phages PBSX, PBSZ, and PBP 180 of Bacillus subtilis isolates 168 and W23, and Bacillus phage PBP180 revealed low amino acids similarity, the genes encode similar functional proteins in similar arrangements, including phage tail-sheath (XkdK), tail (XkdO), holin (XhlB), and N-acetylmuramoyl-l-alanine (XlyA). AMPA analysis identified a bactericidal stretch of 13 amino acids in the ~48 kD sequenced protein of Bl 1821L. Antagonistic activity of the purified ~48 kD phage tail-like protein in the assays differed remarkably from the crude lysate by causing a decrease of 34.2% in the number of viable cells of Bl 1951, 18 h after treatment as compared to the control. Overall, the identified inducible phage tail-like particle is likely to have implications for the in vitro growth of the insect pathogenic isolate Bl 1821L.
革兰氏阳性和孢子形成细菌短芽孢杆菌(Bl)属于短芽孢杆菌 Brevis 聚类群。该物种的分离株已被证明对广泛的无脊椎害虫和植物病害具有杀虫活性。两种新西兰分离株 Bl 1821L 和 Bl 1951 正在作为生物农药开发,用于防治小菜蛾和其他害虫。然而,由于这些地方分离株的生长往往受到限制,因此可能会出现生产问题。基于以前的工作,假设可能存在噬菌体。在调查破坏生长的原因时,Bl 1821L 的粗裂解物的电子显微镜照片显示出噬菌体尾状结构的存在。使用含有 PEG 8000 沉淀的软琼脂覆盖方法来区分假定噬菌体和噬菌体尾状结构(细菌素)的拮抗活性。检测证实不存在假定噬菌体的活性。使用相同的方法,发现 Bl 1821L 裂解物对几种革兰氏阳性细菌具有广谱抗菌活性。蔗糖密度梯度纯化和 10 kD MWCO 浓缩裂解物的 SDS-PAGE 显示出约 48 kD 的突出蛋白带,透射电子显微镜显示存在多糖鞘样结构。约 48 kD 蛋白的 N 末端测序映射到一个基因,该基因与 Bacillus PBSX 噬菌体样元件 xkdK 的弱预测氨基酸同源性,其翻译产物与另一个已发表的基因组 LMG15441 的噬菌体尾鞘蛋白具有> 90%的氨基酸相似性。生物信息学分析还在 Bl 1951 基因组中鉴定出 xkdK 同源物。然而,在 Bl 1821L 和 Bl 1951 基因组中 xkdK 基因周围区域的基因组比较发现了差异,包括 Bl 1951 中含有两个甘氨酸丰富的蛋白编码基因,其中包含不完美的重复(1700 bp),而在类似的 Bl 1821L 区域则存在假定的噬菌体区域。尽管对 Bl 1821L 和 Bl 1951 PBSX 样区域的基因组组织与枯草芽孢杆菌 168 和 W23 的缺陷噬菌体 PBSX、PBSZ 和 PBP 180 以及 Bacillus 噬菌体 PBP180 进行了比较分析,但氨基酸相似性较低,但编码的基因在相似的排列中具有相似的功能蛋白,包括噬菌体尾鞘(XkdK)、尾(XkdO)、溶孔(XhlB)和 N-乙酰基胞壁酰-L-丙氨酸(XlyA)。AMPA 分析鉴定出 Bl 1821L 中约 48 kD 测序蛋白中有 13 个杀菌氨基酸序列。与对照相比,在处理后 18 小时,纯化的约 48 kD 噬菌体尾状蛋白在试验中对 Bl 1951 的活菌数的减少有明显的拮抗作用,减少了 34.2%。总体而言,鉴定出的诱导性噬菌体尾状颗粒可能对昆虫致病分离株 Bl 1821L 的体外生长有影响。