• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

活性位点工程改变真菌铜自由基氧化酶中的碳水化合物区域特异性。

Active-Site Engineering Switches Carbohydrate Regiospecificity in a Fungal Copper Radical Oxidase.

作者信息

Mathieu Yann, Cleveland Maria E, Brumer Harry

机构信息

Michael Smith Laboratories, University of British Columbia, 2185 East Mall, Vancouver, British Columbia V6T 1Z4, Canada.

BioProducts Institute, University of British Columbia, 2385 East Mall, Vancouver, British Columbia V6T 1Z4, Canada.

出版信息

ACS Catal. 2022 Aug 19;12(16):10264-10275. doi: 10.1021/acscatal.2c01956. Epub 2022 Aug 5.

DOI:10.1021/acscatal.2c01956
PMID:36033369
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9397409/
Abstract

Copper radical oxidases (CROs) from Auxiliary Activity Family 5, Subfamily 2 (AA5_2), are organic cofactor-free biocatalysts for the selective oxidation of alcohols to the corresponding aldehydes. AA5_2 CROs comprise canonical galactose-6-oxidases as well as the more recently discovered general alcohol oxidases and aryl alcohol oxidases. Guided by primary and tertiary protein structural analyses, we targeted a distinct extended loop in the active site of a aryl alcohol oxidase (AAO) to explore its effect on catalysis in the broader context of AA5_2. Deletion of this loop, which is bracketed by a conserved disulfide bridge, significantly reduced the inherent activity of the enzyme toward extended galacto-oligosaccharides, as anticipated from molecular modeling. Unexpectedly, kinetic and product analysis on a range of monosaccharides and disaccharides revealed that an altered carbohydrate specificity in AAO-Δloop was accompanied by a complete change in regiospecificity from C-6 to C-1 oxidation, thereby generating aldonic acids. C-1 regiospecificity is unprecedented in AA5 enzymes and is classically associated with flavin-dependent carbohydrate oxidases of Auxiliary Activity Family 3. Thus, this work further highlights the catalytic adaptability of the unique mononuclear copper radical active site and provides a basis for the design of improved biocatalysts for diverse potential applications.

摘要

来自辅助活性家族5亚家族2(AA5_2)的铜自由基氧化酶(CROs)是无有机辅因子的生物催化剂,可将醇选择性氧化为相应的醛。AA5_2 CROs包括典型的半乳糖-6-氧化酶以及最近发现的一般醇氧化酶和芳基醇氧化酶。在一级和三级蛋白质结构分析的指导下,我们针对芳基醇氧化酶(AAO)活性位点中一个独特的延伸环,以在AA5_2的更广泛背景下探索其对催化作用的影响。如分子模型所预期的那样,删除这个由保守二硫键包围的环,显著降低了该酶对延伸的低聚半乳糖的固有活性。出乎意料的是,对一系列单糖和二糖的动力学和产物分析表明,AAO-Δ环中碳水化合物特异性的改变伴随着区域特异性从C-6氧化到C-1氧化的完全变化,从而生成糖醛酸。C-1区域特异性在AA5酶中是前所未有的,并且经典地与辅助活性家族3的黄素依赖性碳水化合物氧化酶相关。因此,这项工作进一步突出了独特的单核铜自由基活性位点的催化适应性,并为设计用于各种潜在应用的改良生物催化剂提供了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/fd72b78e7baa/cs2c01956_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/fa921800dd4e/cs2c01956_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/5b009087c264/cs2c01956_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/981a92e2548a/cs2c01956_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/82906d94d75a/cs2c01956_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/fd72b78e7baa/cs2c01956_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/fa921800dd4e/cs2c01956_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/5b009087c264/cs2c01956_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/981a92e2548a/cs2c01956_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/82906d94d75a/cs2c01956_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e7c/9397409/fd72b78e7baa/cs2c01956_0006.jpg

相似文献

1
Active-Site Engineering Switches Carbohydrate Regiospecificity in a Fungal Copper Radical Oxidase.活性位点工程改变真菌铜自由基氧化酶中的碳水化合物区域特异性。
ACS Catal. 2022 Aug 19;12(16):10264-10275. doi: 10.1021/acscatal.2c01956. Epub 2022 Aug 5.
2
A survey of substrate specificity among Auxiliary Activity Family 5 copper radical oxidases.辅助活性家族 5 铜自由基氧化酶底物特异性研究综述。
Cell Mol Life Sci. 2021 Dec;78(24):8187-8208. doi: 10.1007/s00018-021-03981-w. Epub 2021 Nov 5.
3
Rational engineering of AA5_2 copper radical oxidases to probe the molecular determinants governing their substrate selectivity.对AA5_2铜自由基氧化酶进行合理改造,以探究决定其底物选择性的分子决定因素。
FEBS J. 2023 May;290(10):2658-2672. doi: 10.1111/febs.16713. Epub 2023 Jan 19.
4
Two Fusarium copper radical oxidases with high activity on aryl alcohols.两种对芳基醇具有高活性的镰刀菌铜自由基氧化酶。
Biotechnol Biofuels. 2021 Jun 16;14(1):138. doi: 10.1186/s13068-021-01984-0.
5
Identification of Copper-Containing Oxidoreductases in the Secretomes of Three Species with a Focus on Copper Radical Oxidases for the Biocatalytic Production of Fatty Aldehydes.鉴定三种物种分泌组中的含铜氧化还原酶,重点是铜自由基氧化酶,用于生物催化生产脂肪醛。
Appl Environ Microbiol. 2021 Nov 24;87(24):e0152621. doi: 10.1128/AEM.01526-21. Epub 2021 Oct 6.
6
Expansion of Auxiliary Activity Family 5 sequence space via biochemical characterization of six new copper radical oxidases.通过对 6 种新型铜自由基氧化酶的生化特性分析,拓展辅助活性家族 5 的序列空间。
Appl Environ Microbiol. 2024 Jul 24;90(7):e0101424. doi: 10.1128/aem.01014-24. Epub 2024 Jul 2.
7
A unique AA5 alcohol oxidase fused with a catalytically inactive CE3 domain from the bacterium Burkholderia pseudomallei.一种独特的AA5醇氧化酶,与来自伪马尔他布鲁氏菌的催化无活性的CE3结构域融合。
FEBS Lett. 2023 Jul;597(13):1779-1791. doi: 10.1002/1873-3468.14632. Epub 2023 May 11.
8
A Novel Colletotrichum graminicola Raffinose Oxidase in the AA5 Family.一种来自AA5家族的新型禾谷炭疽病菌棉子糖氧化酶。
Appl Environ Microbiol. 2017 Sep 29;83(20). doi: 10.1128/AEM.01383-17. Print 2017 Oct 15.
9
Copper radical oxidases: galactose oxidase, glyoxal oxidase, and beyond!铜自由基氧化酶:半乳糖氧化酶、乙二醛氧化酶,以及更多!
Essays Biochem. 2023 Apr 18;67(3):597-613. doi: 10.1042/EBC20220124.
10
Structure-function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family.结构-功能表征揭示了半乳糖氧化酶和乙二醛氧化酶家族中新的催化多样性。
Nat Commun. 2015 Dec 18;6:10197. doi: 10.1038/ncomms10197.

引用本文的文献

1
Chimerolectins: Classification, structural architecture, and functional perspectives.嵌合凝集素:分类、结构架构及功能展望
Protein Sci. 2025 Sep;34(9):e70261. doi: 10.1002/pro.70261.
2
Protein-derived cofactors: chemical innovations expanding enzyme catalysis.蛋白质衍生的辅因子:拓展酶催化作用的化学创新
Chem Soc Rev. 2025 May 6;54(9):4502-4530. doi: 10.1039/d4cs00981a.

本文引用的文献

1
Oxidase enzymes as sustainable oxidation catalysts.氧化酶作为可持续的氧化催化剂。
R Soc Open Sci. 2022 Jan 12;9(1):211572. doi: 10.1098/rsos.211572. eCollection 2022 Jan.
2
HMDB 5.0: the Human Metabolome Database for 2022.HMDB 5.0:2022 年人类代谢组数据库。
Nucleic Acids Res. 2022 Jan 7;50(D1):D622-D631. doi: 10.1093/nar/gkab1062.
3
Harnessing galactose oxidase in the development of a chemoenzymatic platform for glycoconjugate vaccine design.利用半乳糖氧化酶开发糖缀合物疫苗设计的化学酶平台。
J Biol Chem. 2022 Jan;298(1):101453. doi: 10.1016/j.jbc.2021.101453. Epub 2021 Nov 25.
4
A survey of substrate specificity among Auxiliary Activity Family 5 copper radical oxidases.辅助活性家族 5 铜自由基氧化酶底物特异性研究综述。
Cell Mol Life Sci. 2021 Dec;78(24):8187-8208. doi: 10.1007/s00018-021-03981-w. Epub 2021 Nov 5.
5
Identification of Copper-Containing Oxidoreductases in the Secretomes of Three Species with a Focus on Copper Radical Oxidases for the Biocatalytic Production of Fatty Aldehydes.鉴定三种物种分泌组中的含铜氧化还原酶,重点是铜自由基氧化酶,用于生物催化生产脂肪醛。
Appl Environ Microbiol. 2021 Nov 24;87(24):e0152621. doi: 10.1128/AEM.01526-21. Epub 2021 Oct 6.
6
Optimizing operational parameters for the enzymatic production of furandicarboxylic acid building block.优化酶法生产呋喃二甲酸基块的操作参数。
Microb Cell Fact. 2021 Sep 9;20(1):180. doi: 10.1186/s12934-021-01669-1.
7
A Putative Lignin Copper Oxidase from .一种来自……的假定木质素铜氧化酶。
J Fungi (Basel). 2021 Aug 7;7(8):643. doi: 10.3390/jof7080643.
8
Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
9
Two Fusarium copper radical oxidases with high activity on aryl alcohols.两种对芳基醇具有高活性的镰刀菌铜自由基氧化酶。
Biotechnol Biofuels. 2021 Jun 16;14(1):138. doi: 10.1186/s13068-021-01984-0.
10
Comparative characterization of glyoxal oxidase from Phanerochaete chrysosporium expressed at high levels in Pichia pastoris and Trichoderma reesei.在巴斯德毕赤酵母和里氏木霉中高水平表达的黄褐网柄牛肝菌过氧化物酶的比较表征。
Enzyme Microb Technol. 2021 Apr;145:109748. doi: 10.1016/j.enzmictec.2021.109748. Epub 2021 Jan 28.