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从马来西亚分离出的两株携带新型D类分子β-内酰胺酶基因的类鼻疽伯克霍尔德菌菌株的近全基因组测序

Near-Complete Whole-Genome Sequencing of Two Burkholderia pseudomallei Strains Harbouring Novel Molecular Class D Beta-Lactamase Genes, Isolated from Malaysia.

作者信息

Zainulabid Ummu Afeera, Mohamad Zain Norirwanisyam, Arumugam Janaki, Kamarudin Norhidayah, Zainal Abidin Muhammad 'Adil, Abd Mokti Abdullah Shamshir, Nordin Noorlina, Faizal Rakawi Ahmad, Abdul Majid Aman Shah, Ashok Gnanasekaran, Francis Alex Lourdes, Tay Darren Dean, Vijayalakshami Natesan, Hin How Soon, Ahmad Hajar Fauzan

机构信息

Kulliyyah of Medicine, International Islamic University of Malaysia, Jalan Sultan Ahmad Shah, Kuantan, Pahang, Malaysia.

Faculty of Industrial Sciences and Technology, Universiti Malaysia Pahang, Lebuhraya Tun Razak, Gambang, Pahang, Malaysia.

出版信息

Microbiol Resour Announc. 2022 Oct 20;11(10):e0046822. doi: 10.1128/mra.00468-22. Epub 2022 Aug 31.

DOI:10.1128/mra.00468-22
PMID:36043870
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9583775/
Abstract

Here, we present two 7.1- and 7.3-bp near-complete genome sequences of Burkholderia pseudomallei strains of HTAA077 and HRPB058, isolated from a pus culture from a confirmed melioidosis patient at Hospital Tengku Ampuan Afzan, Kuantan, Malaysia, and from blood culture from a patient at Hospital Raja Permaisuri Bainun, Ipoh, Malaysia, using a Nanopore MinION instrument.

摘要

在此，我们展示了从马来西亚关丹登古安潘阿夫赞医院一名确诊类鼻疽患者的脓液培养物中分离出的伯克霍尔德菌假鼻疽杆菌菌株HTAA077和从马来西亚怡保拉惹佩尔迈苏里拜努恩医院一名患者的血培养物中分离出的HRPB058的两个近乎完整的基因组序列，长度分别为7.1和7.3碱基对，使用的是纳米孔MinION仪器。

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The Epidemiology of Melioidosis and Its Association with Diabetes Mellitus: A Systematic Review and Meta-Analysis.类鼻疽的流行病学及其与糖尿病的关联：一项系统评价和荟萃分析。
Pathogens. 2022 Jan 25;11(2):149. doi: 10.3390/pathogens11020149.
2
Melioidosis: clinical aspects.类鼻疽病：临床方面。
Clin Med (Lond). 2022 Jan;22(1):6-8. doi: 10.7861/clinmed.2022-0014.
3
Epidemiological and Clinical Characteristics of Melioidosis Caused by Gentamicin-Susceptible in Sarawak, Malaysia.马来西亚砂拉越地区由对庆大霉素敏感的类鼻疽杆菌引起的类鼻疽病的流行病学和临床特征
Open Forum Infect Dis. 2021 Sep 3;8(10):ofab460. doi: 10.1093/ofid/ofab460. eCollection 2021 Oct.
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Microbiol Resour Announc. 2019 Jun 13;8(24):e00379-19. doi: 10.1128/MRA.00379-19.
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Modeling leaderless transcription and atypical genes results in more accurate gene prediction in prokaryotes.无领导转录和非典型基因的建模可提高原核生物中基因预测的准确性。
Genome Res. 2018 Jul;28(7):1079-1089. doi: 10.1101/gr.230615.117. Epub 2018 May 17.
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