• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

(爵床科)的完整叶绿体基因组。

The complete chloroplast genome of (Acanthaceae).

作者信息

Wan Guoqing, Liu Yanhui, Zheng Yanjun, Gu Xuefeng, Lu Changlian

机构信息

Shanghai Key Laboratory of Molecular Imaging, Zhoupu Hospital, Shanghai University of Medicine and Health Sciences, Shanghai, PR China.

School of Pharmacy, Shanghai University of Medicine and Health Sciences, Shanghai, PR China.

出版信息

Mitochondrial DNA B Resour. 2022 Aug 26;7(8):1553-1554. doi: 10.1080/23802359.2022.2111979. eCollection 2022.

DOI:10.1080/23802359.2022.2111979
PMID:36046107
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9423863/
Abstract

We reported and characterized the complete chloroplast genome sequence of Blume 1826. belongs to the Acanthaceae family and has a number of local names including Batuzin, Bayam Karang, Kotz Bellin, and Pekka Batu, which is native to Malaysian with diverse beneficial uses. Green leaves were determined using next-generation sequencing. We found that the entire chloroplast genome of was 144,987 bp in length, included four segments, named a large single-copy (LSC) region (92,556 bp), a small single-copy (SSC) region (17,783 bp), and a pair inverted repeat regions (IRs) (17,324 bp in each), respectively. The chloroplast genome of contained a total of 129 functional genes, including 84 protein-coding genes, 37 transfer RNAs (tRNAs), and eight ribosomal RNA (rRNA) genes. The phylogenetic tree reconstructed by nine chloroplast genomes reveals that is most closely related to and .

摘要

我们报道并描述了1826年布卢姆(Blume)的完整叶绿体基因组序列。布卢姆属于爵床科,有许多当地名称,包括巴图津(Batuzin)、巴扬卡朗(Bayam Karang)、科茨贝林(Kotz Bellin)和佩卡 Batu,原产于马来西亚,有多种有益用途。使用下一代测序确定绿叶。我们发现布卢姆的整个叶绿体基因组长度为144,987 bp,包括四个片段,分别命名为大单拷贝(LSC)区域(92,556 bp)、小单拷贝(SSC)区域(17,783 bp)和一对反向重复区域(IRs)(每个17,324 bp)。布卢姆的叶绿体基因组总共包含129个功能基因,包括84个蛋白质编码基因、37个转移RNA(tRNA)和8个核糖体RNA(rRNA)基因。由九个叶绿体基因组重建的系统发育树表明,布卢姆与[具体物种1]和[具体物种2]关系最为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d1/9423863/f3e3ef7ced29/TMDN_A_2111979_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d1/9423863/f3e3ef7ced29/TMDN_A_2111979_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d1/9423863/f3e3ef7ced29/TMDN_A_2111979_F0001_B.jpg

相似文献

1
The complete chloroplast genome of (Acanthaceae).(爵床科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2022 Aug 26;7(8):1553-1554. doi: 10.1080/23802359.2022.2111979. eCollection 2022.
2
Peculiarities of the inverted repeats in the complete chloroplast genome of Lindau.林道完整叶绿体基因组中反向重复序列的特性
Mitochondrial DNA B Resour. 2021 Apr 22;6(4):1440-1447. doi: 10.1080/23802359.2021.1911699.
3
The complete chloroplast genome sequence of Lindau.林道的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2021 May 27;6(6):1786-1787. doi: 10.1080/23802359.2021.1934144.
4
Sequencing and Analysis of (Nees) Kuntze Chloroplast Genome Revealed the Rare Simultaneous Contraction and Expansion of the Inverted Repeat Region in Angiosperm.(尼氏)孔茨叶绿体基因组的测序与分析揭示了被子植物中反向重复区域罕见的同时收缩和扩张。
Front Plant Sci. 2018 Mar 14;9:324. doi: 10.3389/fpls.2018.00324. eCollection 2018.
5
The complete chloroplast genome of (Acanthaceae).(爵床科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 May 19;6(6):1668-1669. doi: 10.1080/23802359.2021.1927868.
6
The complete chloroplast genome of ornamental plant C.Wright (Acanthaceae).观赏植物C. Wright(爵床科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2021 Jun 17;6(7):2017-2018. doi: 10.1080/23802359.2021.1935347. eCollection 2021.
7
The complete chloroplast genome sequence and phylogenetic analysis of (W.W.Sm.) Benoist 1935 (Acanthaceae).(W.W.斯迈思)贝诺伊斯特1935年发表的(爵床科)植物的叶绿体全基因组序列及系统发育分析
Mitochondrial DNA B Resour. 2024 Apr 4;9(4):465-469. doi: 10.1080/23802359.2024.2316069. eCollection 2024.
8
The complete chloroplast genome of Dicliptera tinctoria (Nees) Kostel. and comparative analysis of chloroplast genomes in Acanthaceae.染色黄细心(Nees)科斯特尔的完整叶绿体基因组及爵床科叶绿体基因组的比较分析。
Genet Mol Biol. 2024 Jun 14;47(2):e20230297. doi: 10.1590/1678-4685-GMB-2023-0297. eCollection 2024.
9
Sequencing and phylogenetic analysis of the complete chloroplast genome of Blume.走马胎叶绿体全基因组测序及系统发育分析
Mitochondrial DNA B Resour. 2021 Oct 23;6(11):3297-3299. doi: 10.1080/23802359.2021.1993460. eCollection 2021.
10
The complete chloroplast genome of (Menispermaceae).(防己科)的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2020 Jul 25;5(3):2992-2993. doi: 10.1080/23802359.2020.1797570.

引用本文的文献

1
The complete chloroplast genome sequence and phylogenetic analysis of Linnaeus 1753 (Lamiaceae), a tropical and subtropical coastal shrub.1753年林奈所记载的唇形科一种热带和亚热带沿海灌木的完整叶绿体基因组序列及系统发育分析
Mitochondrial DNA B Resour. 2025 Aug 5;10(9):779-783. doi: 10.1080/23802359.2025.2541623. eCollection 2025.
2
The complete chloroplast genome sequence and phylogenetic analysis of (W.W.Sm.) Benoist 1935 (Acanthaceae).(W.W.斯迈思)贝诺伊斯特1935年发表的(爵床科)植物的叶绿体全基因组序列及系统发育分析
Mitochondrial DNA B Resour. 2024 Apr 4;9(4):465-469. doi: 10.1080/23802359.2024.2316069. eCollection 2024.
3

本文引用的文献

1
tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genes.tRNAscan-SE 2.0:改进的 tRNA 基因检测和功能分类。
Nucleic Acids Res. 2021 Sep 20;49(16):9077-9096. doi: 10.1093/nar/gkab688.
2
GeSeq - versatile and accurate annotation of organelle genomes.GeSeq - 细胞器基因组的多功能和准确注释。
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
3
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Complete plastid genome structure of 13 Asian Justicia (Acanthaceae) species: comparative genomics and phylogenetic analyses.
13 种亚洲爵床科(爵床科)植物的完整质体基因组结构:比较基因组学和系统发育分析。
BMC Plant Biol. 2023 Nov 15;23(1):564. doi: 10.1186/s12870-023-04532-0.
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
4
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
5
FastTree 2--approximately maximum-likelihood trees for large alignments.FastTree 2--用于大型比对的近似最大似然树。
PLoS One. 2010 Mar 10;5(3):e9490. doi: 10.1371/journal.pone.0009490.