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细菌特征为我们提供了一个了解南海高纬度珊瑚礁中珊瑚适应能力机制的视角。

The bacterial signature offers vision into the machinery of coral fitness across high-latitude coral reef in the South China Sea.

机构信息

Third Institute of Oceanography, Ministry of Natural Resources, Xiamen, People's Republic of China.

Al-Azhar University (Girls Branch), Faculty of Science, Botany & Microbiology Department, Cairo, Egypt.

出版信息

Environ Microbiol Rep. 2023 Feb;15(1):13-30. doi: 10.1111/1758-2229.13119. Epub 2022 Aug 31.

Abstract

Coral-bacterial interaction is a major driver in coral acclimatization to the stressful environment. 16S rRNA High-throughput sequencing was used to classify the role of different coral reef compartments; sediment, water, and tissue; in the South China Sea (SCS), as well as different locations in shaping the microbial community. The majority of OTUs significantly shifted at impacted sites and indicated distinction in the relative abundance of bacteria compartment/site-wise. Richness and diversity were higher, and more taxa were enriched in the sediment communities. Proteobacteria dominated sediment samples, while Cyanobacteria dominated water samples. Coral tissue showed a shift among different sites with Proteobacteria remaining the dominant Phylum. Moreover, we report a dominance of Chlorobium genus in the healthy coral tissue sample collected from the severely damaged Site B, suggesting a contribution to tolerance and adaptation to the disturbing environment. Thus, revealing the complex functionally diverse microbial patterns associated with biotic and abiotic disturbed coral reefs will deliver understanding of the symbiotic connections and competitive benefit inside the hosts niche and can reveal a measurable footprint of the environmental impacts on coral ecosystems. We hence, urge scientists to draw more attention towards using coral microbiome as a self-sustaining tool in coral restoration.

摘要

珊瑚-细菌相互作用是珊瑚适应压力环境的主要驱动力。本研究使用 16S rRNA 高通量测序来分类不同珊瑚礁隔室(沉积物、水和组织)在塑造微生物群落方面的作用,以及不同地点的作用。大多数 OTUs 在受影响的地点发生显著变化,并表明细菌隔室/地点的相对丰度存在差异。丰富度和多样性较高,沉积物群落中富集了更多的分类群。变形菌门在沉积物样本中占主导地位,而蓝细菌在水样中占主导地位。珊瑚组织在不同地点之间发生了变化,变形菌门仍然是主要的门。此外,我们报告了在严重受损的 Site B 采集的健康珊瑚组织样本中 Chlorobium 属的优势地位,表明其对耐受和适应干扰环境有贡献。因此,揭示与生物和非生物干扰珊瑚礁相关的复杂功能多样的微生物模式,将有助于理解宿主小生境中的共生联系和竞争优势,并可以揭示环境对珊瑚生态系统影响的可衡量足迹。因此,我们敦促科学家更多地关注利用珊瑚微生物组作为珊瑚恢复的自我维持工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/20f4/10103774/0791fa0629af/EMI4-15-13-g006.jpg

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