• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

域间相互作用调节人诱导型一氧化氮合酶的活性位点动力学。

Interdomain Interactions Modulate the Active Site Dynamics of Human Inducible Nitric Oxide Synthase.

机构信息

Department of Chemistry, Indiana University, Bloomington, Indiana 47405, United States.

Department of Pharmaceutical Sciences, University of New Mexico, Albuquerque, New Mexico 87131, United States.

出版信息

J Phys Chem B. 2022 Sep 15;126(36):6811-6819. doi: 10.1021/acs.jpcb.2c04091. Epub 2022 Sep 3.

DOI:10.1021/acs.jpcb.2c04091
PMID:36056879
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10110350/
Abstract

Nitric oxide synthase (NOS) is a homodimeric flavohemoprotein responsible for catalyzing the oxidation of l-arginine (l-Arg) to citrulline and nitric oxide. Electrons are supplied for the reaction via interdomain electron transfer between an N-terminal heme-containing oxygenase domain and a FMN-containing (sub)domain of a C-terminal reductase domain. Extensive attention has focused on elucidating how conformational dynamics regulate electron transfer between the domains. Here we investigate the impact of the interdomain FMN-heme interaction on the heme active site dynamics of inducible NOS (iNOS). Steady state linear and time-resolved two-dimensional infrared (2D IR) spectroscopy was applied to probe a CO ligand at the heme within the oxygenase domain for full-length and truncated or mutated constructs of human iNOS. Whereas the linear IR spectra of the CO ligand were identical among the constructs, 2D IR spectroscopy revealed variation in the frequency dynamics. The wild-type constructs that can properly form the FMN/oxygenase docked state due to the presence of both the FMN and oxygenase domains showed slower dynamics than the oxygenase domain alone. Introduction of the mutation (E546N) predicted to perturb electrostatic interactions between the domains resulted in measured dynamics intermediate between those for the full-length and individual oxygenase domain, consistent with perturbation to the docked/undocked equilibrium. These results indicate that docking of the FMN domain to the oxygenase domain not only brings the FMN cofactor within electron transfer distance of the heme domain but also modulates the dynamics sensed by the CO ligand within the active site in a way expected to promote efficient electron transfer.

摘要

一氧化氮合酶(NOS)是一种同二聚体黄素血红素蛋白,负责催化 l-精氨酸(l-Arg)氧化为瓜氨酸和一氧化氮。电子通过 N 端含血红素的加氧酶结构域和 C 端还原酶结构域中含 FMN 的(亚)结构域之间的域间电子转移为反应提供电子。人们广泛关注阐明构象动力学如何调节两个结构域之间的电子转移。在这里,我们研究了结构域间 FMN-血红素相互作用对诱导型 NOS(iNOS)血红素活性位点动力学的影响。稳态线性和时间分辨二维红外(2D IR)光谱被应用于探测氧合酶结构域内血红素中的 CO 配体,用于全长和截短或突变的人 iNOS 构建体。尽管 CO 配体的线性 IR 光谱在构建体之间相同,但 2D IR 光谱显示出频率动力学的变化。由于同时存在 FMN 和加氧酶结构域,能够正确形成 FMN/加氧酶对接状态的野生型构建体表现出比单独的加氧酶结构域更慢的动力学。引入预测会扰乱结构域之间静电相互作用的突变(E546N)导致测量的动力学介于全长和单个加氧酶结构域之间,与对接/非对接平衡的扰动一致。这些结果表明,FMN 结构域与加氧酶结构域的对接不仅使 FMN 辅因子处于血红素结构域的电子转移距离内,而且以预期促进有效电子转移的方式调节活性位点内 CO 配体感知的动力学。

相似文献

1
Interdomain Interactions Modulate the Active Site Dynamics of Human Inducible Nitric Oxide Synthase.域间相互作用调节人诱导型一氧化氮合酶的活性位点动力学。
J Phys Chem B. 2022 Sep 15;126(36):6811-6819. doi: 10.1021/acs.jpcb.2c04091. Epub 2022 Sep 3.
2
Mutations in the FMN domain modulate MCD spectra of the heme site in the oxygenase domain of inducible nitric oxide synthase.黄素单核苷酸(FMN)结构域中的突变可调节诱导型一氧化氮合酶加氧酶结构域中血红素位点的MCD光谱。
J Am Chem Soc. 2009 May 27;131(20):6940-1. doi: 10.1021/ja902141v.
3
Insight into structural rearrangements and interdomain interactions related to electron transfer between flavin mononucleotide and heme in nitric oxide synthase: A molecular dynamics study.一氧化氮合酶中黄素单核苷酸与血红素之间电子转移相关的结构重排和结构域间相互作用的深入研究:一项分子动力学研究
J Inorg Biochem. 2015 Dec;153:186-196. doi: 10.1016/j.jinorgbio.2015.08.006. Epub 2015 Aug 7.
4
Pulsed EPR determination of the distance between heme iron and FMN centers in a human inducible nitric oxide synthase.脉冲电子顺磁共振法测定人诱导型一氧化氮合酶中铁卟啉和 FMN 中心之间的距离。
J Am Chem Soc. 2010 Sep 1;132(34):12059-67. doi: 10.1021/ja104461p.
5
Intraprotein electron transfer in a two-domain construct of neuronal nitric oxide synthase: the output state in nitric oxide formation.神经元型一氧化氮合酶双结构域构建体中的蛋白内电子转移:一氧化氮形成中的输出状态
Biochemistry. 2006 May 23;45(20):6354-62. doi: 10.1021/bi060223n.
6
Dissecting regulation mechanism of the FMN to heme interdomain electron transfer in nitric oxide synthases.解析 FMN 到血红素域间电子转移在一氧化氮合酶中的调控机制。
J Inorg Biochem. 2014 Jan;130:130-40. doi: 10.1016/j.jinorgbio.2013.09.005. Epub 2013 Sep 13.
7
Regulatory role of Glu546 in flavin mononucleotide-heme electron transfer in human inducible nitric oxide synthase.谷氨酸 546 在人诱导型一氧化氮合酶中黄素单核苷酸-血红素电子转移中的调节作用。
Inorg Chem. 2013 May 6;52(9):4795-801. doi: 10.1021/ic3020892. Epub 2013 Apr 9.
8
Analyzing the FMN-heme interdomain docking interactions in neuronal and inducible NOS isoforms by pulsed EPR experiments and conformational distribution modeling.通过脉冲 EPR 实验和构象分布建模分析神经元型和诱导型 NOS 同工型中 FMN-血红素的域间对接相互作用。
J Biol Inorg Chem. 2024 Sep;29(6):611-623. doi: 10.1007/s00775-024-02068-8. Epub 2024 Aug 13.
9
An isoform-specific pivot modulates the electron transfer between the flavin mononucleotide and heme centers in inducible nitric oxide synthase.一种同工型特异性枢轴调节可诱导型一氧化氮合酶中黄素单核苷酸和血红素中心之间的电子转移。
J Biol Inorg Chem. 2020 Dec;25(8):1097-1105. doi: 10.1007/s00775-020-01824-w. Epub 2020 Oct 14.
10
Elucidating nitric oxide synthase domain interactions by molecular dynamics.通过分子动力学阐明一氧化氮合酶结构域间的相互作用。
Protein Sci. 2016 Feb;25(2):374-82. doi: 10.1002/pro.2824. Epub 2015 Oct 22.

引用本文的文献

1
Ultrafast Dynamics in Flavocytochrome C by Using Transient Absorption and Femtosecond Fluorescence Lifetime Spectroscopy.利用瞬态吸收和飞秒荧光寿命光谱研究黄素细胞色素C中的超快动力学
J Phys Chem B. 2025 Apr 17;129(15):3731-3739. doi: 10.1021/acs.jpcb.4c05496. Epub 2025 Apr 8.
2
Emerging approaches to investigating functional protein dynamics in modular redox enzymes: Nitric oxide synthase as a model system.研究模块化氧化还原酶中功能性蛋白质动力学的新方法:以一氧化氮合酶为模型系统
J Biol Chem. 2025 Mar;301(3):108282. doi: 10.1016/j.jbc.2025.108282. Epub 2025 Feb 8.
3
An Evaluation of Maximum Determination Methods for Center Line Slope Analysis.

本文引用的文献

1
Inducible nitric oxide synthase: Regulation, structure, and inhibition.诱导型一氧化氮合酶:调控、结构与抑制。
Med Res Rev. 2020 Jan;40(1):158-189. doi: 10.1002/med.21599. Epub 2019 Jun 13.
2
Nitric oxide synthase enzymology in the 20 years after the Nobel Prize.诺贝尔生理学或医学奖之后 20 年的一氧化氮合酶酶学研究
Br J Pharmacol. 2019 Jan;176(2):177-188. doi: 10.1111/bph.14533. Epub 2018 Dec 9.
3
Extended timescale 2D IR probes of proteins: p-cyanoselenophenylalanine.蛋白质的扩展时间尺度二维红外探针:对氰基硒代苯丙氨酸
中心线性坡度分析的最大判定方法评价。
J Phys Chem B. 2023 May 18;127(19):4268-4276. doi: 10.1021/acs.jpcb.2c07565. Epub 2023 May 9.
Phys Chem Chem Phys. 2017 Apr 12;19(15):10081-10086. doi: 10.1039/c7cp00403f.
4
A perspective on conformational control of electron transfer in nitric oxide synthases.一氧化氮合酶中电子传递构象控制的研究展望。
Nitric Oxide. 2017 Feb 28;63:61-67. doi: 10.1016/j.niox.2016.09.002. Epub 2016 Sep 9.
5
Elucidating nitric oxide synthase domain interactions by molecular dynamics.通过分子动力学阐明一氧化氮合酶结构域间的相互作用。
Protein Sci. 2016 Feb;25(2):374-82. doi: 10.1002/pro.2824. Epub 2015 Oct 22.
6
Insight into structural rearrangements and interdomain interactions related to electron transfer between flavin mononucleotide and heme in nitric oxide synthase: A molecular dynamics study.一氧化氮合酶中黄素单核苷酸与血红素之间电子转移相关的结构重排和结构域间相互作用的深入研究:一项分子动力学研究
J Inorg Biochem. 2015 Dec;153:186-196. doi: 10.1016/j.jinorgbio.2015.08.006. Epub 2015 Aug 7.
7
Probing the Hydrogen Bonding of the Ferrous-NO Heme Center of nNOS by Pulsed Electron Paramagnetic Resonance.利用脉冲电子顺磁共振探测神经元型一氧化氮合酶亚铁-NO血红素中心的氢键作用
J Phys Chem A. 2015 Jun 25;119(25):6641-9. doi: 10.1021/acs.jpca.5b01804. Epub 2015 Jun 12.
8
Conformational landscape and the selectivity of cytochrome P450cam.细胞色素P450cam的构象景观与选择性
J Phys Chem B. 2015 Jun 4;119(22):6620-7. doi: 10.1021/acs.jpcb.5b03896. Epub 2015 May 21.
9
Molecular architecture of mammalian nitric oxide synthases.哺乳动物一氧化氮合酶的分子结构
Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):E3614-23. doi: 10.1073/pnas.1413763111. Epub 2014 Aug 14.
10
Pulsed electron paramagnetic resonance study of domain docking in neuronal nitric oxide synthase: the calmodulin and output state perspective.神经元型一氧化氮合酶中结构域对接的脉冲电子顺磁共振研究:钙调蛋白与输出状态视角
J Phys Chem A. 2014 Aug 28;118(34):6864-72. doi: 10.1021/jp503547w. Epub 2014 Jul 31.