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利用拉曼光谱法解析海马神经元成熟过程中内部环境的异质性

Deciphering the Heterogeneity of the Internal Environment of Hippocampal Neurons during Maturation by Raman Spectroscopy.

作者信息

Kong Xiaodong, Liang Haoyue, Zhou Kexuan, Wang Haoyu, Li Dai, Zhang Shishuang, Sun Ning, Gong Min, Zhou Yuan, Zhang Qiang

机构信息

Department of Geriatrics, Tianjin Medical University General Hospital, Tianjin Geriatrics Institute, Tianjin 300052, China.

State Key Laboratory of Experimental Hematology, National Clinical Research Center for Blood Diseases, Haihe Laboratory of Cell Ecosystem, Institute of Hematology and Blood Diseases Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Tianjin 300020, China.

出版信息

ACS Omega. 2022 Aug 19;7(34):30571-30581. doi: 10.1021/acsomega.2c04188. eCollection 2022 Aug 30.

DOI:10.1021/acsomega.2c04188
PMID:36061692
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9435027/
Abstract

Hippocampal neurons are sensitive to changes in the internal environment and play a significant role in controlling learning, memory, and emotions. A remarkable characteristic of the aging brain is its ability to shift from a state of normal inflammation to excessive inflammation. Various cognitive abilities of the elderly may suffer from serious harm due to the change in the neural environment. Hippocampal neurons may have various subsets involved in controlling their internal environment at different stages of development. Developmental differences may eventually result from complex changes in the dynamic neuronal system brought on by metabolic changes. In this study, we used an in vitro hippocampal neuron model cultured in C57BL/6J mice in conjugation with Raman spectroscopy to examine the relative alterations in potential biomarkers, such as levels of metabolites in the internal environment of hippocampal neurons at various developmental stages. The various differentially expressed genes (DEGs) of hippocampal neurons at various developmental stages were simultaneously screened using bioinformatics, and the biological functions as well as the various regulatory pathways of DEGs were preliminarily analyzed, providing an essential reference for investigating novel therapeutic approaches for diseases that cause cognitive impairment, such as Alzheimer's disease. A stable hippocampal neuron model was established using the GIBCO C57BL/6J hippocampal neuron cell line as a donor and in vitro hippocampal neuron culture technology. The Raman peak intensities of culture supernatants from the experimental groups incubated for 0, 7, and 14 days in vitro(DIV) were examined. The GEO database was used to screen for different DEGs associated with various developmental stages. The data was then analyzed using a statistical method called orthogonal partial least squares discriminant analysis (OPLS-DA). The levels of ketogenic and glycogenic amino acids (such as tryptophan, phenylalanine, and tyrosine), lipid intake rate, glucose utilization rate, and nucleic acid expression in the internal environment of hippocampal neurons were significantly different in the 14 DIV group compared to the 0 DIV and 7 DIV groups ( < 0.01). The top 10 DEGs with neuronal maturation were screened, and the results were compared to the OPLS-DA model's analysis of the differential peaks. It was found that different genes involved in maturation can directly relate to changes in the body's levels of ketogenic and glycogenic amino acids ( < 0.01). The altered expression of the maturation-related genes epidermal growth factor receptor, protein tyrosine kinase 2-beta, discs large MAGUK scaffold protein 2, and Ras protein-specific guanine nucleotide releasing factor 1 may be connected to the altered uptake of ketogenic and glycogenic amino acids and nucleic acids in the internal environment of neurons at different developmental stages. The levels of ketogenic, glycogenic amino acids, and lipid intake increased while glucose utilization decreased, which may be related to mature neurons' metabolism and energy use. The decline in nucleic acid consumption could be connected to synaptic failure. The Raman spectroscopy fingerprint results of relevant biomarkers in conjugation with multivariable analysis and biological action targets suggested by differential genes interpret the heterogeneity of the internal environment of mature hippocampal neurons in the process of maturation, open a new idea for exploring the dynamic mechanism of the exchange energy metabolism of information molecules in the internal environment of hippocampal neurons, and provide a new method for studying this process.

摘要

海马神经元对内部环境的变化敏感,在控制学习、记忆和情绪方面发挥着重要作用。衰老大脑的一个显著特征是其能够从正常炎症状态转变为过度炎症状态。由于神经环境的变化,老年人的各种认知能力可能会受到严重损害。海马神经元可能有不同的亚群在发育的不同阶段参与控制其内部环境。发育差异最终可能源于代谢变化引起的动态神经元系统的复杂变化。在本研究中,我们使用在C57BL/6J小鼠中培养的体外海马神经元模型并结合拉曼光谱,来检测潜在生物标志物的相对变化,例如海马神经元在不同发育阶段内部环境中代谢物的水平。利用生物信息学同时筛选出不同发育阶段海马神经元的各种差异表达基因(DEGs),并初步分析DEGs的生物学功能以及各种调控途径,为研究导致认知障碍的疾病(如阿尔茨海默病)的新型治疗方法提供重要参考。以GIBCO C57BL/6J海马神经元细胞系为供体,采用体外海马神经元培养技术建立了稳定的海马神经元模型。检测了体外培养0、7和14天(DIV)的实验组培养上清液的拉曼峰强度。利用GEO数据库筛选与不同发育阶段相关的不同DEGs。然后使用一种称为正交偏最小二乘判别分析(OPLS-DA)的统计方法对数据进行分析。与0 DIV组和7 DIV组相比,14 DIV组海马神经元内部环境中的生酮和生糖氨基酸(如色氨酸、苯丙氨酸和酪氨酸)水平、脂质摄取率、葡萄糖利用率和核酸表达存在显著差异(<0.01)。筛选出与神经元成熟相关的前10个DEGs,并将结果与OPLS-DA模型对差异峰的分析进行比较。发现参与成熟的不同基因可直接与体内生酮和生糖氨基酸水平的变化相关(<0.01)。与成熟相关的基因表皮生长因子受体、蛋白酪氨酸激酶2-β、盘状大MAGUK支架蛋白2和Ras蛋白特异性鸟嘌呤核苷酸释放因子1表达的改变,可能与不同发育阶段神经元内部环境中生酮和生糖氨基酸以及核酸摄取的改变有关。生酮、生糖氨基酸和脂质摄取水平升高而葡萄糖利用率降低,这可能与成熟神经元的代谢和能量利用有关。核酸消耗的下降可能与突触功能障碍有关。相关生物标志物的拉曼光谱指纹结果与多变量分析以及差异基因提示的生物作用靶点相结合,解释了成熟海马神经元在成熟过程中内部环境的异质性,为探索海马神经元内部环境中信息分子交换能量代谢的动态机制开辟了新思路,并为研究这一过程提供了新方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/aeee311b57d3/ao2c04188_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/814e53715636/ao2c04188_0002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/631b59580164/ao2c04188_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/aeee311b57d3/ao2c04188_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/814e53715636/ao2c04188_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/b17f418d6052/ao2c04188_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/631b59580164/ao2c04188_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5278/9435027/aeee311b57d3/ao2c04188_0005.jpg

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