Zhang Shannon S, Lee Jessica K, Tukachinsky Hanna, Schrock Alexa B, Nagasaka Misako, Ou Sai-Hong Ignatius
Department of Medicine, University of California Irvine School of Medicine, Orange, California.
Foundation Medicine Inc., Cambridge, Massachusetts.
JTO Clin Res Rep. 2022 Aug 6;3(9):100387. doi: 10.1016/j.jtocrr.2022.100387. eCollection 2022 Sep.
Germline mutations are rare and have not been associated with increased risk of NSCLC.
We identified two sequential primary NSCLCs harboring distinct actionable driver alterations (EGFR E746 _S752 delinsV and ) in a patient with NSCLC with a novel germline mutation S5fs∗54 (c.14_20delCGGATGT). We queried a genomic database of NSCLC samples profiled by plasma next-generation sequencing (Foundation Medicine Inc.) and performed a literature search of germline mutations in NSCLC.
Of 6101 patients with unique NSCLC profiled by plasma next-generation sequencing, 53 cases (0.87%) of germline mutation were identified (male-to-female ratio, 49%:51%; median age = 75 y). The median allele frequency of was 49% (interquartile range: 49%-51%). Ten unique germline mutations were identified. Literature review identified 15 additional cases of germline mutations in NSCLC. Overall, a total of 70 germline mutations (21 unique alterations) were identified. Among these 70 germline mutations, 54.3% were amino acid substitutions (point mutation), 40.0% were frameshift mutations, and 5.7% were splice site mutations. Of these 70 total cases assessed, 29 (41.4%) potentially actionable driver alterations were identified with G12C mutation (27.6%) being the most common and G12A/C/D/R/S/V mutations together constituting 51.7% of these driver mutations.
Germline mutations are rare in NSCLC. A large proportion of these cases harbor actionable driver alterations. The relationship between germline mutations and actionable driver alterations in NSCLC may be worth further investigation.
胚系突变罕见,且与非小细胞肺癌(NSCLC)风险增加无关。
我们在一名患有新型胚系突变S5fs∗54(c.14_20delCGGATGT)的NSCLC患者中,鉴定出两个连续的原发性NSCLC,其携带不同的可靶向驱动改变(EGFR E746_S752 delinsV和)。我们查询了通过血浆下一代测序(Foundation Medicine公司)分析的NSCLC样本的基因组数据库,并对NSCLC中的胚系突变进行了文献检索。
在通过血浆下一代测序分析的6101例独特的NSCLC患者中,鉴定出53例(0.87%)胚系突变(男女比例为49%:51%;中位年龄 = 75岁)。的中位等位基因频率为49%(四分位间距:49%-51%)。鉴定出10种独特的胚系突变。文献综述确定了NSCLC中另外15例胚系突变病例。总体而言,共鉴定出70种胚系突变(21种独特的改变)。在这70种胚系突变中,54.3%为氨基酸替换(点突变),40.0%为移码突变,5.7%为剪接位点突变。在评估的这70例总病例中,鉴定出29例(41.4%)潜在可靶向驱动改变,其中G12C突变(27.6%)最为常见,G12A/C/D/R/S/V突变共同构成这些驱动突变的51.7%。
胚系突变在NSCLC中罕见。这些病例中有很大一部分携带可靶向驱动改变。NSCLC中胚系突变与可靶向驱动改变之间的关系可能值得进一步研究。