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高比例携带种系突变的非小细胞肺癌存在可靶向治疗的驱动基因改变:癌症基因组数据库调查及文献综述

A High Percentage of NSCLC With Germline Mutation Harbors Actionable Driver Alterations: Survey of a Cancer Genomic Database and Review of Literature.

作者信息

Zhang Shannon S, Lee Jessica K, Tukachinsky Hanna, Schrock Alexa B, Nagasaka Misako, Ou Sai-Hong Ignatius

机构信息

Department of Medicine, University of California Irvine School of Medicine, Orange, California.

Foundation Medicine Inc., Cambridge, Massachusetts.

出版信息

JTO Clin Res Rep. 2022 Aug 6;3(9):100387. doi: 10.1016/j.jtocrr.2022.100387. eCollection 2022 Sep.

Abstract

INTRODUCTION

Germline mutations are rare and have not been associated with increased risk of NSCLC.

METHODS

We identified two sequential primary NSCLCs harboring distinct actionable driver alterations (EGFR E746 _S752 delinsV and ) in a patient with NSCLC with a novel germline mutation S5fs∗54 (c.14_20delCGGATGT). We queried a genomic database of NSCLC samples profiled by plasma next-generation sequencing (Foundation Medicine Inc.) and performed a literature search of germline mutations in NSCLC.

RESULTS

Of 6101 patients with unique NSCLC profiled by plasma next-generation sequencing, 53 cases (0.87%) of germline mutation were identified (male-to-female ratio, 49%:51%; median age = 75 y). The median allele frequency of was 49% (interquartile range: 49%-51%). Ten unique germline mutations were identified. Literature review identified 15 additional cases of germline mutations in NSCLC. Overall, a total of 70 germline mutations (21 unique alterations) were identified. Among these 70 germline mutations, 54.3% were amino acid substitutions (point mutation), 40.0% were frameshift mutations, and 5.7% were splice site mutations. Of these 70 total cases assessed, 29 (41.4%) potentially actionable driver alterations were identified with G12C mutation (27.6%) being the most common and G12A/C/D/R/S/V mutations together constituting 51.7% of these driver mutations.

CONCLUSIONS

Germline mutations are rare in NSCLC. A large proportion of these cases harbor actionable driver alterations. The relationship between germline mutations and actionable driver alterations in NSCLC may be worth further investigation.

摘要

引言

胚系突变罕见,且与非小细胞肺癌(NSCLC)风险增加无关。

方法

我们在一名患有新型胚系突变S5fs∗54(c.14_20delCGGATGT)的NSCLC患者中,鉴定出两个连续的原发性NSCLC,其携带不同的可靶向驱动改变(EGFR E746_S752 delinsV和)。我们查询了通过血浆下一代测序(Foundation Medicine公司)分析的NSCLC样本的基因组数据库,并对NSCLC中的胚系突变进行了文献检索。

结果

在通过血浆下一代测序分析的6101例独特的NSCLC患者中,鉴定出53例(0.87%)胚系突变(男女比例为49%:51%;中位年龄 = 75岁)。的中位等位基因频率为49%(四分位间距:49%-51%)。鉴定出10种独特的胚系突变。文献综述确定了NSCLC中另外15例胚系突变病例。总体而言,共鉴定出70种胚系突变(21种独特的改变)。在这70种胚系突变中,54.3%为氨基酸替换(点突变),40.0%为移码突变,5.7%为剪接位点突变。在评估的这70例总病例中,鉴定出29例(41.4%)潜在可靶向驱动改变,其中G12C突变(27.6%)最为常见,G12A/C/D/R/S/V突变共同构成这些驱动突变的51.7%。

结论

胚系突变在NSCLC中罕见。这些病例中有很大一部分携带可靶向驱动改变。NSCLC中胚系突变与可靶向驱动改变之间的关系可能值得进一步研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1df/9429789/fd87a016ad0f/gr1.jpg

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