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在 中全基因组鉴定 PIN 生长素外排载体基因家族

Genome-Wide Characterization of PIN Auxin Efflux Carrier Gene Family in .

机构信息

Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, College of Life Sciences, South China Normal University, Guangzhou 510631, China.

Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.

出版信息

Int J Mol Sci. 2022 Sep 5;23(17):10183. doi: 10.3390/ijms231710183.

Abstract

, recognized as one of the world's top 10 pernicious weeds, is a rapidly spreading tropical vine that has invaded the coastal areas of South China, causing serious economic losses and environmental damage. Rapid stem growth is an important feature of which may be related to its greater number of genes involved in auxin signaling and transport pathways and its ability to synthesize more auxin under adverse conditions to promote or maintain stem growth. Plant growth and development is closely connected to the regulation of endogenous hormones, especially the polar transport and asymmetric distribution of auxin. The PIN-FORMED (PIN) auxin efflux carrier gene family plays a key role in the polar transport of auxin and then regulates the growth of different plant tissues, which could indicate that the rapid growth of is closely related to this PIN-dependent auxin regulation. In this study, 11 PIN genes were identified and the phylogenetic relationship and structural compositions of the gene family in were analyzed by employing multiple bioinformatic methods. The phylogenetic analysis indicated that the PIN proteins could be divided into five distinct clades. The structural analysis revealed that three putative types of PIN (canonical, noncanonical and semi-canonical) exist among the proteins according to the length and the composition of the hydrophilic domain. The majority of the PINs were involved in the process of axillary bud differentiation and stem response under abiotic stress, indicating that may regulate its growth, development and stress response by regulating PIN expression in the axillary bud and stem, which may help explain its strong growth ability and environmental adaptability. Our study emphasized the structural features and stress response patterns of the PIN gene family and provided useful insights for further study into the molecular mechanism of auxin-regulated growth and control in .

摘要

薇甘菊,被公认为世界上最具危害性的 10 种杂草之一,是一种迅速蔓延的热带藤本植物,已入侵中国华南沿海地区,造成严重的经济损失和环境破坏。快速的茎生长是 的一个重要特征,这可能与其参与生长素信号和运输途径的基因数量较多有关,并且在逆境下能够合成更多的生长素,以促进或维持茎的生长。植物的生长和发育与内源激素的调节密切相关,特别是生长素的极性运输和不对称分布。PIN 形成蛋白(PIN)生长素外排载体基因家族在生长素的极性运输中起着关键作用,进而调节不同植物组织的生长,这表明 的快速生长可能与这种依赖 PIN 的生长素调节密切相关。在本研究中,鉴定了 11 个 PIN 基因,并采用多种生物信息学方法分析了 PIN 基因家族在 中的系统发育关系和结构组成。系统发育分析表明,PIN 蛋白可分为五个不同的分支。结构分析表明,根据亲水结构域的长度和组成,三种推定类型的 PIN(经典型、非经典型和半经典型)存在于蛋白质中。大多数 PIN 参与腋芽分化和非生物胁迫下茎的响应过程,这表明 通过调节腋芽和茎中 PIN 的表达,可能调节其生长、发育和对胁迫的响应,这有助于解释其较强的生长能力和环境适应性。本研究强调了 PIN 基因家族的结构特征和胁迫响应模式,为进一步研究生长素调节生长和控制 的分子机制提供了有用的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e05a/9456128/2ed6615d6e12/ijms-23-10183-g001.jpg

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