Sano K, Matsui K
Gene. 1987;53(2-3):191-200. doi: 10.1016/0378-1119(87)90007-2.
The trp genes of Brevibacterium lactofermentum lie within a 7.72-kb HapII-BamHI fragment whose sequence has been determined (Matsui et al., 1986). The 5'- and the 3'-flanking regions of this gene cluster were subcloned as a 1.8-kb PstI-PstI and a 0.6-kb XhoI-BamHI fragment, respectively. The 5'-flanking region encodes two open reading frames (ORFs); one corresponds to trpL, while the other corresponds to the N-terminal half of the trpE gene. Within the 17 amino acid residues of the predicted leader peptide encoded by trpL are found three contiguous tryptophan residues. By subcloning parts of the 1.8-kb PstI-PstI fragment into promoter probe vectors, a promoter situated 32 bp upstream from the presumptive trpL gene was identified. The -35 and the -10 region of this promoter, TACACA and AATAAT, respectively, are very similar to the Escherichia coli trp promoter. The trp promoter of B. lactofermentum functions in E. coli. A 14-bp imperfect palindrome that overlaps the -10 region apparently functions in B. lactofermentum but not in E. coli as a trp operator. Upstream of trpE, attenuator-like sequences are found that resemble the corresponding E. coli sequences. The 0.6-kb XhoI-BamHI 3'-flanking fragment contains one ORF that encodes the C-terminal part of trpA. Downstream from trpA lies a Rho-independent terminator that resembles E. coli sequences that are situated downstream from the E. coli trp operon. Thus the trp control regions of the Gram-positive B. lactofermentum are more closely related in structure to the corresponding regions of the Gram-negative E. coli than to those of the Gram-positive Bacillus subtilis.
乳酸发酵短杆菌的色氨酸基因位于一个7.72 kb的HapII - BamHI片段内,其序列已被测定(Matsui等人,1986年)。该基因簇的5'和3'侧翼区域分别被亚克隆为一个1.8 kb的PstI - PstI片段和一个0.6 kb的XhoI - BamHI片段。5'侧翼区域编码两个开放阅读框(ORF);一个对应于trpL,另一个对应于trpE基因的N端一半。在trpL编码的预测前导肽的17个氨基酸残基内发现了三个相邻的色氨酸残基。通过将1.8 kb的PstI - PstI片段的部分亚克隆到启动子探针载体中,鉴定出一个位于假定的trpL基因上游32 bp处的启动子。该启动子的 - 35区和 - 10区分别为TACACA和AATAAT,与大肠杆菌色氨酸启动子非常相似。乳酸发酵短杆菌的色氨酸启动子在大肠杆菌中起作用。一个与 - 10区重叠的14 bp不完全回文序列在乳酸发酵短杆菌中显然作为色氨酸操纵子起作用,但在大肠杆菌中不起作用。在trpE上游发现了类似衰减子的序列,类似于相应的大肠杆菌序列。0.6 kb的XhoI - BamHI 3'侧翼片段包含一个ORF,编码trpA的C端部分。trpA下游是一个不依赖Rho的终止子,类似于位于大肠杆菌色氨酸操纵子下游的大肠杆菌序列。因此,革兰氏阳性乳酸发酵短杆菌的色氨酸控制区域在结构上与革兰氏阴性大肠杆菌的相应区域比与革兰氏阳性枯草芽孢杆菌的相应区域更密切相关。